RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ARSHQ5FYA8 562 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 TMTC4Q5T4D3 741 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 EMBQ6PCB8 327 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 MIGA2Q7L4E1 593 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PPP1R42Q7Z4L9 355 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 RNF180Q86T96 592 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 HID1Q8IV36 788 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FAM20CQ8IXL6 584 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 ZNF654Q8IZM8 581 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 ANKRD52Q8NB46 1076 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 GOLM1Q8NBJ4 401 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 CHAC2Q8WUX2 184 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 BCL7CQ8WUZ0 217 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 MMS19Q96T76 1030 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PHF20Q9BVI0 1012 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 CEP44Q9C0F1 390 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 RSAD1Q9HA92 442 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 WDR6Q9NNW5 1121 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 SEPT11Q9NVA2 429 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 LARSQ9P2J5 1176 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 SATB2Q9UPW6 733 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 LRCH1Q9Y2L9 728 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 TDRKHQ9Y2W6 561 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 NOX1Q9Y5S8 564 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PTCH2Q9Y6C5 1203 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 SPATA31A6Q5VVP1 1343 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 NWD2Q9ULI1 1742 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 A0A0U1RQJ8 604 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 KANSL1LA0AUZ9 987 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 SLC35F4A4IF30 521 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PI4K2BG5E9Z4 385 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 GOLGA8MH3BSY2 632 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 IFIT3O14879 490 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 CHGBP05060 677 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 KRT16P08779 473 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 ADSLP30566 484 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 GSK3AP49840 483 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 NCALDP61601 193 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 TUBA4AP68366 448 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FOXK2Q01167 660 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 EHHADHQ08426 723 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 ITGB3BPQ13352 177 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 BMPR2Q13873 1038 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 CYLC2Q14093 348 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 MINDY4Q4G0A6 757 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 ODF2Q5BJF6 829 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 SLC22A25Q6T423 547 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 MARK2Q7KZI7 788 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 NLRP9Q7RTR0 991 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 KDELC2Q7Z4H8 507 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 SPATA24Q86W54 205 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PPFIBP1Q86W92 1011 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FSIP1Q8NA03 581 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 NAXEQ8NCW5 288 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 DDI1Q8WTU0 396 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 RUBCNQ92622 972 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 BRF1Q92994 677 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 AIDAQ96BJ3 306 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FAM136AQ96C01 138 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 KLHL29Q96CT2 875 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 VCPIP1Q96JH7 1222 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FAM167AQ96KS9 214 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 IFT74Q96LB3 600 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PRPF18Q99633 342 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 ECT2Q9H8V3 914 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PARVGQ9HBI0 331 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 TRPC7Q9HCX4 862 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PDLIM7Q9NR12 457 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FAIMQ9NVQ4 179 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 ZMYND8Q9ULU4 1186 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PPT2Q9UMR5 302 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FMN2Q9NZ56 1722 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 HMOX1P09601 288 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PDE6AP16499 860 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 DRD4P21917 467 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 CALB2P22676 271 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 RELQ04864 619 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 COG2Q14746 738 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 TAF12Q16514 161 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 KRT71Q3SY84 523 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 DEPDC1Q5TB30 811 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 HAUS3Q68CZ6 603 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 TTBK2Q6IQ55 1244 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 MEX3BQ6ZN04 569 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 PHLDB2Q86SQ0 1253 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 TREML1Q86YW5 311 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 FAM178BQ8IXR5 827 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 SSH3Q8TE77 659 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 DIS3LQ8TF46 1054 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 GJA10Q969M2 543 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 NXPE3Q969Y0 559 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 GIMAP5Q96F15 307 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 LTV1Q96GA3 475 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 CAPZA3Q96KX2 299 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 NSMCE3Q96MG7 304 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 CCDC43Q96MW1 224 aaKnown RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 OLFM3Q96PB7 478 aa4.98□□□□□ -1.61
LINC01109-201ENST00000603837 GAS2L1Q99501 681 aaPredicted RBP4.98□□□□□ -1.61
LINC01109-201ENST00000603837 MENTQ9BUN1 341 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms