RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SIX4Q9UIU6 781 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 RCOR1Q9UKL0 485 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 UBE4BO95155 1302 aa14.09□□□□□ -0.15
LIG1-212ENST00000596549 KPNA7A9QM74 516 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 ACTN4O43707 911 aaKnown RBP14.08□□□□□ -0.16
LIG1-212ENST00000596549 ATF6P18850 670 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 AMPD3Q01432 767 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 TANGO2Q6ICL3 276 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 CCDC105Q8IYK2 499 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 OR5B17Q8NGF7 314 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 SHKBP1Q8TBC3 707 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 ZNF507Q8TCN5 953 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 SCFD1Q8WVM8 642 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 ZSWIM3Q96MP5 696 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 ZNF334Q9HCZ1 680 aaPredicted RBP14.08□□□□□ -0.16
LIG1-212ENST00000596549 ASAH2Q9NR71 780 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 AGPAT3Q9NRZ7 376 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 HSPBP1Q9NZL4 362 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 SERTAD1Q9UHV2 236 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 DSEQ9UL01 958 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 CFAP45Q9UL16 551 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 L1RE1Q9UN81 338 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 SLC27A5Q9Y2P5 690 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 ZNF638Q14966 1978 aaKnown RBP14.08□□□□□ -0.16
LIG1-212ENST00000596549 USP34Q70CQ2 3546 aa14.08□□□□□ -0.16
LIG1-212ENST00000596549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.07□□□□□ -0.16
LIG1-212ENST00000596549 KIAA0391O15091 583 aaKnown RBP14.07□□□□□ -0.16
LIG1-212ENST00000596549 KLRC4O43908 158 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 ECI2O75521 394 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 MICAL2O94851 1124 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 MYL4P12829 197 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 PFKFB1P16118 471 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 AFMP43652 599 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 TEAD2Q15562 447 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 CCDC142Q17RM4 750 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 BMT2Q1RMZ1 405 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 SLC39A12Q504Y0 691 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 FAM78AQ5JUQ0 283 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 STXBP5Q5T5C0 1151 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 IQCEQ6IPM2 695 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 STXBP4Q6ZWJ1 553 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 NELFCDQ8IXH7 590 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 ELMOD1Q8N336 334 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 PDCL2Q8N4E4 241 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 LRRC52Q8N7C0 313 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 LEO1Q8WVC0 666 aaPredicted RBP14.07□□□□□ -0.16
LIG1-212ENST00000596549 ELSPBP1Q96BH3 223 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 ZNF512Q96ME7 567 aaPredicted RBP14.07□□□□□ -0.16
LIG1-212ENST00000596549 ASB16Q96NS5 453 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 LPIN3Q9BQK8 851 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 MKNK1Q9BUB5 465 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 FOXQ1Q9C009 403 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 GZF1Q9H116 711 aaPredicted RBP14.07□□□□□ -0.16
LIG1-212ENST00000596549 TMLHEQ9NVH6 421 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 DLGAP2Q9P1A6 1054 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 ITGA11Q9UKX5 1188 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 HPSEQ9Y251 543 aa14.07□□□□□ -0.16
LIG1-212ENST00000596549 PIEZO1Q92508 2521 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 A0A1W2PRU2 124 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 ZNF197O14709 1029 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 HCRTO43612 131 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 TMEM191BP0C7N4 346 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 PNPLA4P41247 253 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 STARD6P59095 220 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 BFSP1Q12934 665 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 PLD1Q13393 1074 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 SNW1Q13573 536 aaKnown RBP14.06□□□□□ -0.16
LIG1-212ENST00000596549 GRM2Q14416 872 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 MLF2Q15773 248 aaPredicted RBP14.06□□□□□ -0.16
LIG1-212ENST00000596549 PHLDB3Q6NSJ2 640 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 VITQ6UXI7 678 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 OSTM1Q86WC4 334 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 LEMD2Q8NC56 503 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 KIAA0895Q8NCT3 520 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 PJA1Q8NG27 643 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 PSMG2Q969U7 264 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 SEPT5Q99719 369 aaPredicted RBP14.06□□□□□ -0.16
LIG1-212ENST00000596549 DDX23Q9BUQ8 820 aaKnown RBP14.06□□□□□ -0.16
LIG1-212ENST00000596549 INTS13Q9NVM9 706 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 HSFX1Q9UBD0 423 aa14.06□□□□□ -0.16
LIG1-212ENST00000596549 A0A1B0GVL5 298 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 ZNF233A6NK53 670 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 SHISA7A6NL88 538 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 TULP1O00294 542 aaPredicted RBP14.05□□□□□ -0.16
LIG1-212ENST00000596549 CLIC2O15247 247 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 LRRN2O75325 713 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 DCNP07585 359 aaKnown RBP14.05□□□□□ -0.16
LIG1-212ENST00000596549 KRT19P08727 400 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 GLULP15104 373 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 EPHB3P54753 998 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 CYP4A22Q5TCH4 519 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 METTL23Q86XA0 190 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 CSGALNACT2Q8N6G5 542 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 DTWD2Q8NBA8 298 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 ZSCAN18Q8TBC5 510 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms