RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 COL6A3P12111 3177 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 ABLIM3O94929 683 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 ASS1P00966 412 aaKnown RBP15.39■□□□□ 0.05
LIG1-208ENST00000595758 FAM163BP0C2L3 166 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 P4HA1P13674 534 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 CPB1P15086 417 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 LHX1P48742 406 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 MRPS5P82675 430 aaKnown RBP15.39■□□□□ 0.05
LIG1-208ENST00000595758 MYL7Q01449 175 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 CBWD6Q4V339 395 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 CBWD3Q5JTY5 395 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 CBWD5Q5RIA9 395 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 LIN9Q5TKA1 542 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 TPGS2Q68CL5 300 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 SYCE2Q6PIF2 218 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 C11orf57Q6ZUT1 292 aaPredicted RBP15.39■□□□□ 0.05
LIG1-208ENST00000595758 IRF2BP1Q8IU81 584 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 FAM114A1Q8IWE2 563 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 C12orf76Q8N812 135 aaPredicted RBP15.39■□□□□ 0.05
LIG1-208ENST00000595758 CCDC150Q8NCX0 1101 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 FBXL13Q8NEE6 735 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 OR10T2Q8NGX3 314 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 ENOX1Q8TC92 643 aaKnown RBP15.39■□□□□ 0.05
LIG1-208ENST00000595758 ELMO3Q96BJ8 720 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 CNOT6LQ96LI5 555 aaKnown RBP15.39■□□□□ 0.05
LIG1-208ENST00000595758 PI4K2AQ9BTU6 479 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 IMPG2Q9BZV3 1241 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.39■□□□□ 0.051e-14■■■■■ 49.4
LIG1-208ENST00000595758 FBXW11Q9UKB1 542 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 POLIQ9UNA4 740 aa15.39■□□□□ 0.05
LIG1-208ENST00000595758 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.39■□□□□ 0.05
LIG1-208ENST00000595758 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 GABRDO14764 452 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 N4BP1O75113 896 aaKnown RBP15.38■□□□□ 0.05
LIG1-208ENST00000595758 TACC1O75410 805 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 OR4Q2P0C623 313 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 ELF1P32519 619 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 FMO5P49326 533 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 GPR17Q13304 367 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 PUS10Q3MIT2 529 aaKnown RBP15.38■□□□□ 0.05
LIG1-208ENST00000595758 RARS2Q5T160 578 aaKnown RBP15.38■□□□□ 0.05
LIG1-208ENST00000595758 OSTM1Q86WC4 334 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIG1-208ENST00000595758 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.38■□□□□ 0.05
LIG1-208ENST00000595758 KBTBD7Q8WVZ9 684 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 TMEM209Q96SK2 561 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 APOL5Q9BWW9 433 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 ZCWPW1Q9H0M4 648 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 DNAJC25Q9H1X3 360 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 S1PR5Q9H228 398 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 SNX25Q9H3E2 840 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 SFXN1Q9H9B4 322 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 RAB20Q9NX57 234 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 DDX43Q9NXZ2 648 aaKnown RBP15.38■□□□□ 0.05
LIG1-208ENST00000595758 MAGEC2Q9UBF1 373 aaPredicted RBP15.38■□□□□ 0.05
LIG1-208ENST00000595758 AFF4Q9UHB7 1163 aaKnown RBP15.38■□□□□ 0.05
LIG1-208ENST00000595758 MAFFQ9ULX9 164 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 NFE2L3Q9Y4A8 694 aa15.38■□□□□ 0.05
LIG1-208ENST00000595758 PRUNE2Q8WUY3 3088 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 SYCE3A1L190 88 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 PMM2O15305 246 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 ZMYND10O75800 440 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 ATF2P15336 505 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 WARSP23381 471 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 PCSK1P29120 753 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 GNL1P36915 607 aaPredicted RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 MTIF2P46199 727 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 NOP14P78316 857 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 TSPY1Q01534 308 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 ADCY1Q08828 1119 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 CETN1Q12798 172 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 KCNH2Q12809 1159 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 SMAD4Q13485 552 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 WDR44Q5JSH3 913 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 SPOPLQ6IQ16 392 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 PTCRAQ6ISU1 281 aaPredicted RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 CES5AQ6NT32 575 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 RNF19BQ6ZMZ0 732 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 CCDC149Q6ZUS6 474 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 DCP1BQ8IZD4 617 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 SMRP1Q8NCR6 262 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 ASB2Q96Q27 587 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 ACBD6Q9BR61 282 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 MRPL45Q9BRJ2 306 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 NAT10Q9H0A0 1025 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 ADAM7Q9H2U9 754 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 SMYD3Q9H7B4 428 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 SAMSN1Q9NSI8 373 aaKnown RBP15.37■□□□□ 0.05
LIG1-208ENST00000595758 COQ4Q9Y3A0 265 aa15.37■□□□□ 0.05
LIG1-208ENST00000595758 EYSQ5T1H1 3165 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 CCDC195A0A1B0GUA6 201 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 PRRG1O14668 218 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 P4HA2O15460 535 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 LRRN2O75325 713 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 RFPL2O75678 378 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 C8AP07357 584 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 PDGFRBP09619 1106 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms