RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TRIM58Q8NG06 486 aa16.18■□□□□ 0.18
VRK3-207ENST00000594092 TFAP2BQ92481 460 aa16.18■□□□□ 0.18
VRK3-207ENST00000594092 ALS2CR12Q96Q35 445 aa16.18■□□□□ 0.18
VRK3-207ENST00000594092 ZSWIM1Q9BR11 485 aa16.18■□□□□ 0.18
VRK3-207ENST00000594092 MRPL45Q9BRJ2 306 aaKnown RBP16.18■□□□□ 0.18
VRK3-207ENST00000594092 PRDM10Q9NQV6 1147 aa16.18■□□□□ 0.18
VRK3-207ENST00000594092 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
VRK3-207ENST00000594092 MKI67P46013 3256 aaKnown RBP16.18■□□□□ 0.18
VRK3-207ENST00000594092 CASTOR2A6NHX0 329 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 BTNL10A8MVZ5 291 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 PODXLO00592 558 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 RPL9P32969 192 aaKnown RBP16.17■□□□□ 0.18
VRK3-207ENST00000594092 NDST1P52848 882 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 LIMS2Q7Z4I7 341 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 DEFB128Q7Z7B8 93 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 TMEM176AQ96HP8 235 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 NOX5Q96PH1 765 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 ELAC1Q9H777 363 aaKnown RBP16.17■□□□□ 0.18
VRK3-207ENST00000594092 TDRD15B5MCY1 1934 aaKnown RBP16.17■□□□□ 0.18
VRK3-207ENST00000594092 ANKRD62A6NC57 917 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 CYP1A1P04798 512 aaPredicted RBP16.17■□□□□ 0.18
VRK3-207ENST00000594092 TMEM253P0C7T8 217 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 FGFR1P11362 822 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 UNGP13051 313 aaPredicted RBP16.17■□□□□ 0.18
VRK3-207ENST00000594092 SSTR3P32745 418 aaPredicted RBP16.17■□□□□ 0.18
VRK3-207ENST00000594092 GTF2F1P35269 517 aaKnown RBP eCLIP16.17■□□□□ 0.18
VRK3-207ENST00000594092 NAP1L1P55209 391 aaKnown RBP16.17■□□□□ 0.18
VRK3-207ENST00000594092 UPP1Q16831 310 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 ACAD10Q6JQN1 1059 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 TRIM72Q6ZMU5 477 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 CYFIP2Q96F07 1278 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 PAAF1Q9BRP4 392 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 PDCL3Q9H2J4 239 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 L1RE1Q9UN81 338 aa16.17■□□□□ 0.18
VRK3-207ENST00000594092 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.16■□□□□ 0.18
VRK3-207ENST00000594092 SLU7O95391 586 aaKnown RBP16.16■□□□□ 0.18
VRK3-207ENST00000594092 MOCS3O95396 460 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 CD19P15391 556 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 ABCB4P21439 1286 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 TUSC3Q13454 348 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 TUBB2AQ13885 445 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 NOMO2Q5JPE7 1267 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 PASD1Q8IV76 773 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 C3orf58Q8NDZ4 430 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 APPL2Q8NEU8 664 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 KBTBD7Q8WVZ9 684 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 CTNNBL1Q8WYA6 563 aaPredicted RBP16.16■□□□□ 0.18
VRK3-207ENST00000594092 RABGGTAQ92696 567 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 VWCEQ96DN2 955 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 TUBB2BQ9BVA1 445 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 NT5C1AQ9BXI3 368 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 THAP2Q9H0W7 228 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 NME7Q9Y5B8 376 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 PCDHB7Q9Y5E2 793 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 CAPN6Q9Y6Q1 641 aa16.16■□□□□ 0.18
VRK3-207ENST00000594092 NCANO14594 1321 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 BUB1O43683 1085 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 HUS1O60921 280 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 NOMO3P69849 1222 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 NAA35Q5VZE5 725 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 TOP6BLQ8N6T0 577 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 URGCPQ8TCY9 931 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 CPA5Q8WXQ8 436 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 ARHGEF26Q96DR7 871 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
VRK3-207ENST00000594092 PCDHGC3Q9UN70 934 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 TTC3P53804 2025 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 A0A0A6YYK5 440 aaPredicted RBP16.15■□□□□ 0.18
VRK3-207ENST00000594092 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 CYB561D2O14569 222 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 CENPCQ03188 943 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 IFI16Q16666 785 aaKnown RBP16.15■□□□□ 0.18
VRK3-207ENST00000594092 DPH6Q7L8W6 267 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 UNC93AQ86WB7 457 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 CRIPAKQ8N1N5 446 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 OR6B3Q8NGW1 331 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
VRK3-207ENST00000594092 SENP8Q96LD8 212 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 HEXIM2Q96MH2 286 aaKnown RBP16.15■□□□□ 0.18
VRK3-207ENST00000594092 UROC1Q96N76 676 aa16.15■□□□□ 0.18
VRK3-207ENST00000594092 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 MED7O43513 233 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 B4GALT3O60512 393 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 VDRP11473 427 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 EN2P19622 333 aaPredicted RBP16.14■□□□□ 0.17
VRK3-207ENST00000594092 ITGB8P26012 769 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 RFC2P35250 354 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
VRK3-207ENST00000594092 DSC1Q08554 894 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 ADGRF2Q8IZF7 708 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 PDCL2Q8N4E4 241 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 RFFLQ8WZ73 363 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 PRDM5Q9NQX1 630 aaPredicted RBP16.14■□□□□ 0.17
VRK3-207ENST00000594092 TBC1D13Q9NVG8 400 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 KANSL3Q9P2N6 904 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 KIAA1257Q9ULG3 409 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 LRFN2Q9ULH4 789 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 199.5 ms