RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 SSH3Q8TE77 659 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 HTR3CQ8WXA8 447 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 GPRASP2Q96D09 838 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 SGF29Q96ES7 293 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CNDP2Q96KP4 475 aaKnown RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 TBC1D32Q96NH3 1257 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 ACAP3Q96P50 834 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 FAM83CQ9BQN1 747 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 FDXACB1Q9BRP7 624 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 SLC6A17Q9H1V8 727 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 FAM124BQ9H5Z6 455 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 C1orf115Q9H7X2 142 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 TOMM22Q9NS69 142 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 GEMIN8Q9NWZ8 242 aaKnown RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 MTRRQ9UBK8 725 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 SUSD2Q9UGT4 822 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 TBX20Q9UMR3 447 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 TNNQ9UQP3 1299 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CCL26Q9Y258 94 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PCDHGA1Q9Y5H4 931 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 SNX11Q9Y5W9 270 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 MAP1AP78559 2803 aaPredicted RBP3.44□□□□□ -1.86
VRK3-204ENST00000593912 JMJD1CQ15652 2540 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 CNTNAP2Q9UHC6 1331 aa3.44□□□□□ -1.86
VRK3-204ENST00000593912 PKD1L1Q8TDX9 2849 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ESPL1Q14674 2120 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 DENND4CQ5VZ89 1909 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 A0A1W2PNU3 283 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 MEI4A8MW99 385 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 TRIM6-TRIM34B2RNG4 842 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 PATL2C9JE40 543 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 H0Y8X5 98 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 I3L4J1 428 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ZNF213O14771 459 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ADAM23O75077 832 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 USP12O75317 370 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 NR1I2O75469 434 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 DXOO77932 396 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 LDOC1O95751 146 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 CCNE2O96020 404 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 MT-CO3P00414 261 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 SLC3A2P08195 630 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 SFTPCP11686 197 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ITGA4P13612 1032 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 GABRG2P18507 467 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 SFPQP23246 707 aaKnown RBP eCLIP3.43□□□□□ -1.86
VRK3-204ENST00000593912 TKTP29401 623 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 ELF1P32519 619 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 SREBF1P36956 1147 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 CSNK1EP49674 416 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 ERVPABLB-1P60509 514 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ITGB3BPQ13352 177 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 MTMR1Q13613 665 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 BYSLQ13895 437 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 SUZ12Q15022 739 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 SLC35G1Q2M3R5 365 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ZXDCQ2QGD7 858 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 KIF19Q2TAC6 998 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 KCNT1Q5JUK3 1230 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 SYCP2LQ5T4T6 812 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 USP17L6PQ6QN14 398 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 SPNS3Q6ZMD2 512 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 GAREM2Q75VX8 874 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 CXXC5Q7LFL8 322 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 C12orf40Q86WS4 652 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 HOMER1Q86YM7 354 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 KSR1Q8IVT5 923 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 MCEMP1Q8IX19 187 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 CKAP2LQ8IYA6 745 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ELMOD1Q8N336 334 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 STAG2Q8N3U4 1231 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 IL17RCQ8NAC3 791 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 GSTCDQ8NEC7 633 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 TTC16Q8NEE8 873 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ENGASEQ8NFI3 743 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 SPATA3Q8NHX4 192 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 PIGOQ8TEQ8 1089 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 DDX27Q96GQ7 796 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 ZNF419Q96HQ0 510 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 LURAP1Q96LR2 239 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ZNF512Q96ME7 567 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 CCNL2Q96S94 520 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 MMS19Q96T76 1030 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 SEC62Q99442 399 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 ZKSCAN3Q9BRR0 538 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 FUCA2Q9BTY2 467 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 EIF2AQ9BY44 585 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 LRRC3Q9BY71 257 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 GCOM2Q9BZD3 368 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 NAPBQ9H115 298 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ATXN3LQ9H3M9 355 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 CASS4Q9NQ75 786 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ZNF71Q9NQZ8 489 aaPredicted RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 THSD1Q9NS62 852 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ECHDC1Q9NTX5 307 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 MAP3K20Q9NYL2 800 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 KLK14Q9P0G3 267 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ANAPC2Q9UJX6 822 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms