RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 SMG9Q9H0W8 520 aaKnown RBP13.01□□□□□ -0.33
ZNF558-202ENST00000593891 IL21RQ9HBE5 538 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 LRRC4CQ9HCJ2 640 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 FBXL5Q9UKA1 691 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.01□□□□□ -0.33
ZNF558-202ENST00000593891 YIPF1Q9Y548 306 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 TDRD15B5MCY1 1934 aaKnown RBP13.01□□□□□ -0.33
ZNF558-202ENST00000593891 KNTC1P50748 2209 aa13.01□□□□□ -0.33
ZNF558-202ENST00000593891 NBPF19A0A087WUL8 3843 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 SUV39H1O43463 412 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 CHMP2AO43633 222 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 BRINP1O60477 761 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 CYP3A4P08684 503 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 HNRNPLP14866 589 aaKnown RBP eCLIP13□□□□□ -0.33
ZNF558-202ENST00000593891 ARF4P18085 180 aaPredicted RBP13□□□□□ -0.33
ZNF558-202ENST00000593891 BRCC3P46736 316 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 ALDH1A3P47895 512 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 ADCY7P51828 1080 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 BFSP1Q12934 665 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 NR1H3Q13133 447 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 TARDBPQ13148 414 aaKnown RBP eCLIP13□□□□□ -0.33
ZNF558-202ENST00000593891 KRTAP21-3Q3LHN1 58 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 WDR45BQ5MNZ6 344 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 ERICH1Q86X53 443 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
ZNF558-202ENST00000593891 SNRNP27Q8WVK2 155 aaKnown RBP13□□□□□ -0.33
ZNF558-202ENST00000593891 TMEM143Q96AN5 459 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 NAF1Q96HR8 494 aaKnown RBP13□□□□□ -0.33
ZNF558-202ENST00000593891 DCTPP1Q9H773 170 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 ECT2Q9H8V3 914 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 ASB3Q9Y575 518 aa13□□□□□ -0.33
ZNF558-202ENST00000593891 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 K7EQS6 105 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 SYN3O14994 580 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 MARCH6O60337 910 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 STBD1O95210 358 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 CALM1P0DP23 149 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 CALM2P0DP24 149 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 CALM3P0DP25 149 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 CDK4P11802 303 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 IGFBP6P24592 240 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 ELAVL4P26378 380 aaKnown RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 AVPR1AP37288 418 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 USP11P51784 963 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 CLCNKBP51801 687 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 PTH1RQ03431 593 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 NAB2Q15742 525 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 HSF5Q4G112 596 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 PRR16Q569H4 304 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 EOGTQ5NDL2 527 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 DNAJB7Q7Z6W7 309 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 SLC41A1Q8IVJ1 513 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 OTUD7AQ8TE49 926 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 TCP11Q8WWU5 503 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 UROC1Q96N76 676 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 GCNAQ96QF7 691 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 ZMYM5Q9UJ78 669 aa12.99□□□□□ -0.33
ZNF558-202ENST00000593891 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 KIF26AQ9ULI4 1882 aaPredicted RBP12.99□□□□□ -0.33
ZNF558-202ENST00000593891 A0A1B0GTW7 788 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 TCRBV21S2A2A0A5A6 115 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 PLEKHA8P1O95397 391 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 CPB1P15086 417 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 NAPAP54920 295 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 PCBP4P57723 403 aaKnown RBP12.98□□□□□ -0.33
ZNF558-202ENST00000593891 PTENP60484 403 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 RNF19BQ6ZMZ0 732 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 CDR2LQ86X02 465 aaPredicted RBP12.98□□□□□ -0.33
ZNF558-202ENST00000593891 CMTM8Q8IZV2 173 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 TXNDC5Q8NBS9 432 aaKnown RBP12.98□□□□□ -0.33
ZNF558-202ENST00000593891 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 FOXJ1Q92949 421 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 SLC46A2Q9BY10 475 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 GLT8D2Q9H1C3 349 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 DNAJC25Q9H1X3 360 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 KIF9Q9HAQ2 790 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 BTBD3Q9Y2F9 522 aa12.98□□□□□ -0.33
ZNF558-202ENST00000593891 A0A1B0GUA9 196 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 BLACEA4D250 179 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 GAS7O60861 476 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 NDUFS2O75306 463 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 DDAH1O94760 285 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 KLF8O95600 359 aaPredicted RBP12.97□□□□□ -0.33
ZNF558-202ENST00000593891 CDC25CP30307 473 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 GRK6P43250 576 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 CYP4F8P98187 520 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 MRPL58Q14197 206 aaKnown RBP12.97□□□□□ -0.33
ZNF558-202ENST00000593891 UPP1Q16831 310 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 HLA-BQ31612 363 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 ZNF280DQ6N043 979 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 CD300LGQ6UXG3 332 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 ANO5Q75V66 913 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 MIER3Q7Z3K6 550 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 ITIH5Q86UX2 942 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 FERMT3Q86UX7 667 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 ALLCQ8N6M5 410 aa12.97□□□□□ -0.33
ZNF558-202ENST00000593891 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms