RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 ITGA11Q9UKX5 1188 aa9.53□□□□□ -0.88
NPC1-211ENST00000591075 UBQLN1Q9UMX0 589 aaKnown RBP9.53□□□□□ -0.88
NPC1-211ENST00000591075 SIK3Q9Y2K2 1263 aa9.53□□□□□ -0.88
NPC1-211ENST00000591075 XIRP2A4UGR9 3374 aa9.53□□□□□ -0.88
NPC1-211ENST00000591075 ARHGEF37A1IGU5 675 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 TISP43B9A030 160 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 C2CD2LO14523 706 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 MBTPS2O43462 519 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 PHACTR2O75167 634 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 TBX10O75333 385 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 RECQL4O94761 1208 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 DLATP10515 647 aaKnown RBP9.52□□□□□ -0.89
NPC1-211ENST00000591075 HOXB8P17481 243 aaPredicted RBP9.52□□□□□ -0.89
NPC1-211ENST00000591075 PON1P27169 355 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 HNRNPH3P31942 346 aaKnown RBP9.52□□□□□ -0.89
NPC1-211ENST00000591075 LTBRP36941 435 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 PNPLA4P41247 253 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 AFF1P51825 1210 aaKnown RBP9.52□□□□□ -0.89
NPC1-211ENST00000591075 BPIFB4P59827 614 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 OSTNP61366 133 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 RBP5P82980 135 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 GCNT1Q02742 428 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 DLX2Q07687 328 aaPredicted RBP9.52□□□□□ -0.89
NPC1-211ENST00000591075 TRPC3Q13507 836 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 COL19A1Q14993 1142 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 SMAD2Q15796 467 aaKnown RBP9.52□□□□□ -0.89
NPC1-211ENST00000591075 ENOX2Q16206 610 aaKnown RBP9.52□□□□□ -0.89
NPC1-211ENST00000591075 SLC10A6Q3KNW5 377 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 KLHDC7AQ5VTJ3 777 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 EEF1DP3Q658K8 133 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 TMTC1Q8IUR5 882 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 COLGALT2Q8IYK4 626 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 TXLNBQ8N3L3 684 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 BEST2Q8NFU1 509 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 AUTS2Q8WXX7 1259 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 NT5C1BQ96P26 610 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 APOL5Q9BWW9 433 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 HAPLN2Q9GZV7 340 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 ZBP1Q9H171 429 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 PDE11AQ9HCR9 933 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 DZANK1Q9NVP4 752 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 GCNT4Q9P109 453 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 APEX2Q9UBZ4 518 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 DPP7Q9UHL4 492 aa9.52□□□□□ -0.89
NPC1-211ENST00000591075 CASTOR2A6NHX0 329 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 LACTBL1A8MY62 500 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
NPC1-211ENST00000591075 INPPL1O15357 1258 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 CCP110O43303 1012 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 CLASP2O75122 1294 aaKnown RBP9.51□□□□□ -0.89
NPC1-211ENST00000591075 GFPT2O94808 682 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 SOD2P04179 222 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 EDN1P05305 212 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 ADH1AP07327 375 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 UCHL3P15374 230 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 RPL9P32969 192 aaKnown RBP9.51□□□□□ -0.89
NPC1-211ENST00000591075 KRT9P35527 623 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 STAT1P42224 750 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 GCLMP48507 274 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 GLUD2P49448 558 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 PPP3CAQ08209 521 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 ELAVL2Q12926 359 aaKnown RBP9.51□□□□□ -0.89
NPC1-211ENST00000591075 MYO1EQ12965 1108 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 TUSC3Q13454 348 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 BIRC3Q13489 604 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 TMEM132DQ14C87 1099 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 USP41Q3LFD5 358 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 C1orf220Q5T0J3 134 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 ANKRD54Q6NXT1 300 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 TRIM65Q6PJ69 517 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 TRAPPC11Q7Z392 1133 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 CCDC186Q7Z3E2 898 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 TMEM173Q86WV6 379 aaPredicted RBP9.51□□□□□ -0.89
NPC1-211ENST00000591075 LRRC8AQ8IWT6 810 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 ADHFE1Q8IWW8 467 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 CCDC170Q8IYT3 715 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 LRRC52Q8N7C0 313 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 DDX27Q96GQ7 796 aaKnown RBP9.51□□□□□ -0.89
NPC1-211ENST00000591075 SNX27Q96L92 541 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 RIPOR3Q96MK2 946 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 UROC1Q96N76 676 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 SPAG5Q96R06 1193 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 DNAJC7Q99615 494 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 C1QTNF1Q9BXJ1 281 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 TTYH3Q9C0H2 523 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 IKZF4Q9H2S9 585 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 MIOSQ9NXC5 875 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 AIPL1Q9NZN9 384 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 CLEC1BQ9P126 229 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 ADAM28Q9UKQ2 775 aa9.51□□□□□ -0.89
NPC1-211ENST00000591075 USP15Q9Y4E8 981 aaPredicted RBP9.51□□□□□ -0.89
NPC1-211ENST00000591075 SF3B1O75533 1304 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPC1-211ENST00000591075 TRIP11Q15643 1979 aa9.5□□□□□ -0.89
NPC1-211ENST00000591075 KIAA1671Q9BY89 1806 aa9.5□□□□□ -0.89
NPC1-211ENST00000591075 ARHGAP6O43182 974 aa9.5□□□□□ -0.89
NPC1-211ENST00000591075 TRAPPC3O43617 180 aa9.5□□□□□ -0.89
NPC1-211ENST00000591075 MFAP3LO75121 409 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms