RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 MYO1EQ12965 1108 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 TRPC3Q13507 836 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 CCDC142Q17RM4 750 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 SGSM1Q2NKQ1 1148 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 HSP90AA4PQ58FG1 418 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 MIIPQ5JXC2 388 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 TCERG1LQ5VWI1 586 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 PDXDC1Q6P996 788 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 USP37Q86T82 979 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 TATDN2Q93075 761 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.6■■□□□ 1.214e-7■■■■■ 57
CIRBP-229ENST00000590704 RAB20Q9NX57 234 aa22.6■■□□□ 1.21
CIRBP-229ENST00000590704 H7C4K7 107 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 TACC1O75410 805 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 SEC24AO95486 1093 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 ADH1AP07327 375 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 ASPAP45381 313 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 DHX40Q8IX18 779 aaKnown RBP22.59■■□□□ 1.21
CIRBP-229ENST00000590704 FBXL13Q8NEE6 735 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.59■■□□□ 1.21
CIRBP-229ENST00000590704 ZNF461Q8TAF7 563 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 PPP2R3CQ969Q6 453 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 SMYD3Q9H7B4 428 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 TMLHEQ9NVH6 421 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 FANCLQ9NW38 375 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 CDH22Q9UJ99 828 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 FBXW11Q9UKB1 542 aa22.59■■□□□ 1.21
CIRBP-229ENST00000590704 DLL1O00548 723 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 LETM1O95202 739 aaPredicted RBP22.58■■□□□ 1.2
CIRBP-229ENST00000590704 FAM163BP0C2L3 166 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 ZNF18P17022 549 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 WARSP23381 471 aaKnown RBP22.58■■□□□ 1.2
CIRBP-229ENST00000590704 IQCB1Q15051 598 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 ZNF699Q32M78 642 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 ZNF280DQ6N043 979 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 DPY19L2P1Q6NXN4 242 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 ANKRD54Q6NXT1 300 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 RNF19BQ6ZMZ0 732 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 APTXQ7Z2E3 356 aaKnown RBP22.58■■□□□ 1.2
CIRBP-229ENST00000590704 PPFIBP1Q86W92 1011 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 TMEM86AQ8N2M4 240 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 C12orf76Q8N812 135 aaPredicted RBP22.58■■□□□ 1.2
CIRBP-229ENST00000590704 TAF4BQ92750 862 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 HLA-CQ95604 372 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 BCO2Q9BYV7 579 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 ZCWPW1Q9H0M4 648 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 NXF1Q9UBU9 619 aaKnown RBP22.58■■□□□ 1.2
CIRBP-229ENST00000590704 DSEQ9UL01 958 aa22.58■■□□□ 1.2
CIRBP-229ENST00000590704 H3BQ06 376 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-229ENST00000590704 HUS1O60921 280 aa22.57■■□□□ 1.2
CIRBP-229ENST00000590704 FGFR1OPO95684 399 aaKnown RBP22.57■■□□□ 1.2
CIRBP-229ENST00000590704 CCDC192P0DO97 292 aa22.57■■□□□ 1.2
CIRBP-229ENST00000590704 PIK3CAP42336 1068 aa22.57■■□□□ 1.2
CIRBP-229ENST00000590704 CREMQ03060 361 aa22.57■■□□□ 1.2
CIRBP-229ENST00000590704 ADGRF2Q8IZF7 708 aa22.57■■□□□ 1.2
CIRBP-229ENST00000590704 SPATA18Q8TC71 538 aa22.57■■□□□ 1.2
CIRBP-229ENST00000590704 BPIFA3Q9BQP9 254 aa22.57■■□□□ 1.2
CIRBP-229ENST00000590704 A0A0C4DFX4 3053 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 OR6C75A6NL08 312 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 ATP2C2O75185 946 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 GLUD1P00367 558 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 ATF2P15336 505 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 RAP1GAPP47736 663 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 CDR1P51861 262 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 GPR17Q13304 367 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 SKIV2LQ15477 1246 aaKnown RBP22.56■■□□□ 1.2
CIRBP-229ENST00000590704 KREMEN2Q8NCW0 462 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 LPIN3Q9BQK8 851 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 ACBD6Q9BR61 282 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 DDX43Q9NXZ2 648 aaKnown RBP22.56■■□□□ 1.2
CIRBP-229ENST00000590704 COG5Q9UP83 839 aa22.56■■□□□ 1.2
CIRBP-229ENST00000590704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.56■■□□□ 1.2
CIRBP-229ENST00000590704 GRXCR2A6NFK2 248 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 STX10O60499 249 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 RFPL2O75678 378 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 KCNA5P22460 613 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 ACAT1P24752 427 aaKnown RBP22.55■■□□□ 1.2
CIRBP-229ENST00000590704 NOP14P78316 857 aaKnown RBP22.55■■□□□ 1.2
CIRBP-229ENST00000590704 TCP11X2Q5H9J9 407 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 ZNF667Q5HYK9 610 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 FAM171BQ6P995 826 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 TTC9BQ8N6N2 239 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 SMRP1Q8NCR6 262 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 WHAMMQ8TF30 809 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 CASP10Q92851 521 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 ZNF707Q96C28 371 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-229ENST00000590704 MMS19Q96T76 1030 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 MAN1C1Q9NR34 630 aa22.55■■□□□ 1.2
CIRBP-229ENST00000590704 P4HA2O15460 535 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 AFPP02771 609 aaKnown RBP22.54■■□□□ 1.2
CIRBP-229ENST00000590704 WEE2P0C1S8 567 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 ARPP19P56211 112 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 MYL5Q02045 173 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 LEXMQ3ZCV2 418 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 HDAC7Q8WUI4 952 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 OXCT2Q9BYC2 517 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-229ENST00000590704 CRTAC1Q9NQ79 661 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 HMGXB4Q9UGU5 601 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 NOTCH4Q99466 2003 aa22.54■■□□□ 1.2
CIRBP-229ENST00000590704 ARHGEF37A1IGU5 675 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms