RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
SMAD4-210ENST00000590061 PCDHB2Q9Y5E7 798 aa7.88□□□□□ -1.15
SMAD4-210ENST00000590061 CITO14578 2027 aa7.88□□□□□ -1.15
SMAD4-210ENST00000590061 LOC100996750A0A140TA64 210 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 TTC26A0AVF1 554 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 DCDC2BA2VCK2 349 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 ABLIM1O14639 778 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 OFD1O75665 1012 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 GFPT2O94808 682 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 NPTXRO95502 500 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 CXCL10P02778 98 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 CTSHP09668 335 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 GHRP10912 638 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 HARSP12081 509 aaKnown RBP7.87□□□□□ -1.15
SMAD4-210ENST00000590061 BMP4P12644 408 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 RAG1P15918 1043 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 CASP4P49662 377 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 FAM189BP81408 668 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 CDK17Q00537 523 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 GCNT1Q02742 428 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 PPIGQ13427 754 aaKnown RBP eCLIP7.87□□□□□ -1.15
SMAD4-210ENST00000590061 SYCP1Q15431 976 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 ENOX2Q16206 610 aaKnown RBP7.87□□□□□ -1.15
SMAD4-210ENST00000590061 PLEKHG4Q58EX7 1191 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 CNKSR3Q6P9H4 555 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 APTXQ7Z2E3 356 aaKnown RBP7.87□□□□□ -1.15
SMAD4-210ENST00000590061 TMC6Q7Z403 805 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 TMTC1Q8IUR5 882 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 LRRC52Q8N7C0 313 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 SPATA18Q8TC71 538 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 ZNF560Q96MR9 790 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 ADAM2Q99965 735 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 KRTAP4-6Q9BYQ5 205 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 STK33Q9BYT3 514 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 TSPAN10Q9H1Z9 355 aaPredicted RBP7.87□□□□□ -1.15
SMAD4-210ENST00000590061 CYP3A43Q9HB55 503 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 TMEM161AQ9NX61 479 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 GCNT4Q9P109 453 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 CNTN3Q9P232 1028 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 APEX2Q9UBZ4 518 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 TBX21Q9UL17 535 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 KIAA1257Q9ULG3 409 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 ATP11BQ9Y2G3 1177 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 PCDHB7Q9Y5E2 793 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 NR2E3Q9Y5X4 410 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 HTTP42858 3142 aa7.87□□□□□ -1.15
SMAD4-210ENST00000590061 GOLGA8IPA6NC78 632 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 GOLGA8JA6NMD2 632 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 INPPL1O15357 1258 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 B4GALT5O43286 388 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 TRAPPC3O43617 180 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 FAM189A1O60320 539 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 AMHP03971 560 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 THP07101 528 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 ARAFP10398 606 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 FERP16591 822 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 PON1P27169 355 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 CD52P31358 61 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 PBX1P40424 430 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 STAT1P42224 750 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 PIK3CAP42336 1068 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 SNX16P57768 344 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 TFAMQ00059 246 aaKnown RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 DSC3Q14574 896 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 TRIM60Q495X7 471 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 HSP90AA4PQ58FG1 418 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 ARSJQ5FYB0 599 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 XKR4Q5GH76 650 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 KLHDC7AQ5VTJ3 777 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 MFSD5Q6N075 450 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 CRELD2Q6UXH1 353 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 DPH6Q7L8W6 267 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 CCDC170Q8IYT3 715 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 GOLGA6L1Q8N7Z2 621 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 CCDC97Q96F63 343 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 EEF2KMTQ96G04 330 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 CPB2Q96IY4 423 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 ZBTB45Q96K62 511 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 CALR3Q96L12 384 aaKnown RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 SNX27Q96L92 541 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 FAM193BQ96PV7 902 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 LBHD1Q9BQE6 289 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 TMEM117Q9H0C3 514 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 INTS2Q9H0H0 1204 aaKnown RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 VRTNQ9H8Y1 702 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 PDE11AQ9HCR9 933 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 PARP2Q9UGN5 583 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 KLF15Q9UIH9 416 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 DSEQ9UL01 958 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 IPPQ9Y573 584 aa7.86□□□□□ -1.15
SMAD4-210ENST00000590061 GPC6Q9Y625 555 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 DNMT3AQ9Y6K1 912 aaPredicted RBP7.86□□□□□ -1.15
SMAD4-210ENST00000590061 UMODL1Q5DID0 1318 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 GOLGA6L9A6NEM1 432 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 LRRIQ3A6PVS8 624 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 LACTBL1A8MY62 500 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 RECQL4O94761 1208 aa7.85□□□□□ -1.15
SMAD4-210ENST00000590061 C4BPAP04003 597 aaKnown RBP7.85□□□□□ -1.15
SMAD4-210ENST00000590061 TUBB4AP04350 444 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms