RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 SMARCB1Q12824 385 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 PLD1Q13393 1074 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 CAMK4Q16566 473 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 DPH6Q7L8W6 267 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 DCP1BQ8IZD4 617 aaKnown RBP16.4■□□□□ 0.22
MBD1-219ENST00000589733 ADGRF2Q8IZF7 708 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 ELMOD1Q8N336 334 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 PDCL2Q8N4E4 241 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 TDRD5Q8NAT2 981 aaKnown RBP16.4■□□□□ 0.22
MBD1-219ENST00000589733 PLEKHO2Q8TD55 490 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 ZNF707Q96C28 371 aaPredicted RBP16.4■□□□□ 0.22
MBD1-219ENST00000589733 ACSF2Q96CM8 615 aaPredicted RBP16.4■□□□□ 0.22
MBD1-219ENST00000589733 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
MBD1-219ENST00000589733 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 WDR6Q9NNW5 1121 aaKnown RBP16.4■□□□□ 0.22
MBD1-219ENST00000589733 CDH22Q9UJ99 828 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 POLIQ9UNA4 740 aa16.4■□□□□ 0.22
MBD1-219ENST00000589733 CCL16O15467 120 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 STX10O60499 249 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 STAU1O95793 577 aaKnown RBP16.39■□□□□ 0.21
MBD1-219ENST00000589733 OR4Q2P0C623 313 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 PCSK1P29120 753 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 PIK3CAP42336 1068 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 LHX1P48742 406 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 GPR17Q13304 367 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 ZNF699Q32M78 642 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 TDRD10Q5VZ19 366 aaKnown RBP16.39■□□□□ 0.21
MBD1-219ENST00000589733 ANKRD40Q6AI12 368 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 KLHL10Q6JEL2 608 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 RNF19BQ6ZMZ0 732 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 OR10T2Q8NGX3 314 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 C2orf15Q8WU43 125 aaKnown RBP16.39■□□□□ 0.21
MBD1-219ENST00000589733 ZNF516Q92618 1163 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 PGLYRP2Q96PD5 576 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 MMS19Q96T76 1030 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 IMPG2Q9BZV3 1241 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 LMBRD1Q9NUN5 540 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 DDX43Q9NXZ2 648 aaKnown RBP16.39■□□□□ 0.21
MBD1-219ENST00000589733 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 USTQ9Y2C2 406 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 INSL5Q9Y5Q6 135 aa16.39■□□□□ 0.21
MBD1-219ENST00000589733 TRIM49BA6NDI0 452 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 TRIM49P0CI25 452 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 TRIM49CP0CI26 452 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 P4HA1P13674 534 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 SP100P23497 879 aaPredicted RBP16.38■□□□□ 0.21
MBD1-219ENST00000589733 MYL6P60660 151 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 DLG4P78352 724 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 PAK1Q13153 545 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 NCOA4Q13772 614 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 ZACNQ401N2 412 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 SLC39A12Q504Y0 691 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 FOXR2Q6PJQ5 311 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 OTOP3Q7RTS5 596 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 ZC3H3Q8IXZ2 948 aaKnown RBP16.38■□□□□ 0.21
MBD1-219ENST00000589733 PLCD3Q8N3E9 789 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 NELFBQ8WX92 580 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 CEP63Q96MT8 703 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 ZCWPW1Q9H0M4 648 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 VRTNQ9H8Y1 702 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 HSFX1Q9UBD0 423 aa16.38■□□□□ 0.21
MBD1-219ENST00000589733 MTMR11A4FU01 709 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 SEC24AO95486 1093 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
MBD1-219ENST00000589733 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
MBD1-219ENST00000589733 GTF2H1P32780 548 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 NFE2Q16621 373 aaPredicted RBP16.37■□□□□ 0.21
MBD1-219ENST00000589733 WDR72Q3MJ13 1102 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 ZNF667Q5HYK9 610 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 SV2AQ7L0J3 742 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 GRASPQ7Z6J2 395 aaPredicted RBP16.37■□□□□ 0.21
MBD1-219ENST00000589733 CCDC150Q8NCX0 1101 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 SPPL2BQ8TCT7 592 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 TAF4BQ92750 862 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 TMEM209Q96SK2 561 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 RTP3Q9BQQ7 232 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 SNX25Q9H3E2 840 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 YIPF1Q9Y548 306 aa16.37■□□□□ 0.21
MBD1-219ENST00000589733 VCANP13611 3396 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 GABRDO14764 452 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 FAM163BP0C2L3 166 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 BMP6P22004 513 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 WARSP23381 471 aaKnown RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 GBP2P32456 591 aaPredicted RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 ALDH1A3P47895 512 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 PMS1P54277 932 aaKnown RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 TWF1Q12792 350 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 SOWAHAQ2M3V2 549 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 SGSM1Q2NKQ1 1148 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 PABPC1LQ4VXU2 614 aaKnown RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 DCAF17Q5H9S7 520 aaPredicted RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 INTS6LQ5JSJ4 861 aaKnown RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 TCERG1LQ5VWI1 586 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 IQCEQ6IPM2 695 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 GET4Q7L5D6 327 aaPredicted RBP16.36■□□□□ 0.21
MBD1-219ENST00000589733 EEF2KMTQ96G04 330 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 XYLT2Q9H1B5 865 aa16.36■□□□□ 0.21
MBD1-219ENST00000589733 MMRN2Q9H8L6 949 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms