RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 ZPBP2Q6X784 338 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 TMEM130Q8N3G9 435 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 C4orf32Q8N8J7 132 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 TMEM161BQ8NDZ6 487 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 SPIRE2Q8WWL2 714 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 GAB3Q8WWW8 586 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 FAM212AQ96EL1 285 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 TMEM209Q96SK2 561 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 NTPCRQ9BSD7 190 aaKnown RBP16.54■□□□□ 0.24
ACTN4-211ENST00000589528 TASP1Q9H6P5 420 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 RPF1Q9H9Y2 349 aaKnown RBP16.54■□□□□ 0.24
ACTN4-211ENST00000589528 EML5Q05BV3 1969 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 DENND4CQ5VZ89 1909 aa16.54■□□□□ 0.24
ACTN4-211ENST00000589528 CACNA1GO43497 2377 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 TTC26A0AVF1 554 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 H0YCG3 227 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 LAD1O00515 517 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 EXTL3O43909 919 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 ATG13O75143 517 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 PRAMEF12O95522 483 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 ZNF806P0C7X5 589 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 MAPTP10636 758 aaKnown RBP16.53■□□□□ 0.24
ACTN4-211ENST00000589528 GUCY2CP25092 1073 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 CDC25AP30304 524 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 PXNP49023 591 aaPredicted RBP16.53■□□□□ 0.24
ACTN4-211ENST00000589528 TUFMP49411 452 aaKnown RBP16.53■□□□□ 0.24
ACTN4-211ENST00000589528 LIG4P49917 911 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 CYP4F8P98187 520 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 N4BP2L1Q5TBK1 243 aaPredicted RBP16.53■□□□□ 0.24
ACTN4-211ENST00000589528 DTHD1Q6ZMT9 781 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 TTC9BQ8N6N2 239 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 LPIN3Q9BQK8 851 aa16.53■□□□□ 0.24
ACTN4-211ENST00000589528 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
ACTN4-211ENST00000589528 USP24Q9UPU5 2620 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 TSC2P49815 1807 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 LACTBL1A8MY62 500 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 EPN2O95208 641 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 AVPR1AP37288 418 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 TNFSF9P41273 254 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 AARSP49588 968 aaKnown RBP eCLIP16.52■□□□□ 0.249e-10■■■■■ 48
ACTN4-211ENST00000589528 GUCY2FP51841 1108 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 HMGN5P82970 282 aaKnown RBP16.52■□□□□ 0.24
ACTN4-211ENST00000589528 ST3GAL1Q11201 340 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 SLC39A12Q504Y0 691 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 STPG1Q5TH74 334 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 KBTBD6Q86V97 674 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 CDK5RAP3Q96JB5 506 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 SENP8Q96LD8 212 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 MKNK1Q9BUB5 465 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 LARSQ9P2J5 1176 aaKnown RBP16.52■□□□□ 0.24
ACTN4-211ENST00000589528 HSFX1Q9UBD0 423 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 LIMCH1Q9UPQ0 1083 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 PCDHB6Q9Y5E3 794 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 ZFHX4Q86UP3 3567 aa16.52■□□□□ 0.24
ACTN4-211ENST00000589528 SCN1AP35498 2009 aa16.52■□□□□ 0.23
ACTN4-211ENST00000589528 CCDC163A0A0D9SF12 145 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 HNRNPDLO14979 420 aaKnown RBP16.51■□□□□ 0.23
ACTN4-211ENST00000589528 PMLP29590 882 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 HOXC13P31276 330 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 LILRA4P59901 499 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 AMPD2Q01433 879 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 BFSP1Q12934 665 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 KCNK18Q7Z418 384 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 METTL23Q86XA0 190 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 TSPAN18Q96SJ8 248 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 SMG9Q9H0W8 520 aaKnown RBP16.51■□□□□ 0.23
ACTN4-211ENST00000589528 GKN1Q9NS71 199 aa16.51■□□□□ 0.23
ACTN4-211ENST00000589528 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
ACTN4-211ENST00000589528 PAX3P23760 479 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 WEE1P30291 646 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 MPLP40238 635 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 PRPHP41219 470 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 RAP1GAPP47736 663 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 CDR1P51861 262 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
ACTN4-211ENST00000589528 ZBTB6Q15916 424 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 CC2D1AQ6P1N0 951 aaPredicted RBP16.5■□□□□ 0.23
ACTN4-211ENST00000589528 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 EXOC4Q96A65 974 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 PLIN2Q99541 437 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 HAPLN2Q9GZV7 340 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 RXFP3Q9NSD7 469 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 KCND2Q9NZV8 630 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 ZMYM5Q9UJ78 669 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 DSEQ9UL01 958 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 PCDHGA5Q9Y5G8 931 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 OBSL1O75147 1896 aa16.5■□□□□ 0.23
ACTN4-211ENST00000589528 PPEF2O14830 753 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 OGTO15294 1046 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 AKAP3O75969 853 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 LAMA1P25391 3075 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 SHC2P98077 582 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 RUNX3Q13761 415 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 ELF2Q15723 593 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
ACTN4-211ENST00000589528 TMEM196Q5HYL7 178 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 SPATA1Q5VX52 437 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 RNF43Q68DV7 783 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms