RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 KLHL5Q96PQ7 755 aa24.06■■□□□ 1.44
R3HDM4-205ENST00000589445 NIF3L1Q9GZT8 377 aa24.06■■□□□ 1.44
R3HDM4-205ENST00000589445 IRAK3Q9Y616 596 aa24.06■■□□□ 1.44
R3HDM4-205ENST00000589445 CDY1Q9Y6F8 540 aa24.06■■□□□ 1.44
R3HDM4-205ENST00000589445 CYP11A1P05108 521 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 CPB1P15086 417 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 GTF2F1P35269 517 aaKnown RBP eCLIP24.05■■□□□ 1.442e-6■■□□□ 13.5
R3HDM4-205ENST00000589445 HYAL1Q12794 435 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 LRMPQ12912 555 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 IQCB1Q15051 598 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 DUSP6Q16828 381 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 SOWAHAQ2M3V2 549 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 VWA3BQ502W6 1294 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 TMEM86AQ8N2M4 240 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 INTS2Q9H0H0 1204 aaKnown RBP24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 VPS16Q9H269 839 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 VRTNQ9H8Y1 702 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 FBXL5Q9UKA1 691 aa24.05■■□□□ 1.44
R3HDM4-205ENST00000589445 P4HA2O15460 535 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 CLASP2O75122 1294 aaKnown RBP24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 ATP1A3P13637 1013 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 ZNF445P59923 1031 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 THEM5Q8N1Q8 247 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 CRACR2AQ9BSW2 395 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 HSD3B7Q9H2F3 369 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 SNX25Q9H3E2 840 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 NDST4Q9H3R1 872 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 RXFP1Q9HBX9 757 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 APOBEC3GQ9HC16 384 aaKnown RBP24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 RAPGEFL1Q9UHV5 662 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 BACE2Q9Y5Z0 518 aa24.04■■□□□ 1.44
R3HDM4-205ENST00000589445 SPDYE4A6NLX3 237 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 ADAM12O43184 909 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 LILRB3O75022 631 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 OR4Q2P0C623 313 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 ZNF18P17022 549 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 ACAT1P24752 427 aaKnown RBP24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 OR1D2P34982 312 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 ASPAP45381 313 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 MIIPQ5JXC2 388 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 PALB2Q86YC2 1186 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 GPR65Q8IYL9 337 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 RNF214Q8ND24 703 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 NT5C1BQ96P26 610 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 CLSTN3Q9BQT9 956 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 MRPL45Q9BRJ2 306 aaKnown RBP24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 DDX43Q9NXZ2 648 aaKnown RBP24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 FNIP2Q9P278 1114 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 COQ4Q9Y3A0 265 aa24.03■■□□□ 1.44
R3HDM4-205ENST00000589445 OR6C75A6NL08 312 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 HCRTO43612 131 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 OAZ2O95190 189 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 GLUD1P00367 558 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 PLA2G5P39877 138 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 COPB1P53618 953 aaKnown RBP24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 ROR1Q01973 937 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 MRPL58Q14197 206 aaKnown RBP24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 RSPO2Q6UXX9 243 aaPredicted RBP24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 GBP6Q6ZN66 633 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 OSTM1Q86WC4 334 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 OR6B3Q8NGW1 331 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 OR10T2Q8NGX3 314 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 KBTBD7Q8WVZ9 684 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 CDCA3Q99618 268 aaPredicted RBP24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 LIMA1Q9UHB6 759 aaKnown RBP24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 MUC3AQ02505 3323 aa24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 MTCL1Q9Y4B5 1905 aaKnown RBP24.02■■□□□ 1.44
R3HDM4-205ENST00000589445 LINC01565O15544 149 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 SRGAP2BP0DMP2 458 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 EPCAMP16422 314 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 CD58P19256 250 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 WARSP23381 471 aaKnown RBP24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 CDH8P55286 799 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 RBM10P98175 930 aaKnown RBP24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 TSPY1Q01534 308 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 DPH6Q7L8W6 267 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 PPFIBP1Q86W92 1011 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 TMEM209Q96SK2 561 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 ARID3AQ99856 593 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 SDCBP2Q9H190 292 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 CLDND1Q9NY35 253 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 HCFC2Q9Y5Z7 792 aa24.01■■□□□ 1.43
R3HDM4-205ENST00000589445 FSD2A1L4K1 749 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 PMM2O15305 246 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 WEE2P0C1S8 567 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 LHX1P48742 406 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 CDR1P51861 262 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 PSMC1P62191 440 aaKnown RBP24■■□□□ 1.43
R3HDM4-205ENST00000589445 EXOC3L4Q17RC7 722 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 FKBP15Q5T1M5 1219 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 PPM1KQ8N3J5 372 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 SPATA18Q8TC71 538 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 TATDN2Q93075 761 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 FAM122AQ96E09 287 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 PGLYRP2Q96PD5 576 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 RTP3Q9BQQ7 232 aa24■■□□□ 1.43
R3HDM4-205ENST00000589445 OXCT2Q9BYC2 517 aaPredicted RBP24■■□□□ 1.43
R3HDM4-205ENST00000589445 WDR27A2RRH5 827 aa23.99■■□□□ 1.43
R3HDM4-205ENST00000589445 TACC1O75410 805 aa23.99■■□□□ 1.43
R3HDM4-205ENST00000589445 SPATA31D3P0C874 917 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms