RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 OBP2AQ9NY56 170 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 CNTN3Q9P232 1028 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 TUBGCP4Q9UGJ1 667 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 TPCN1Q9ULQ1 816 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 SLC27A5Q9Y2P5 690 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 TIMM13Q9Y5L4 95 aaPredicted RBP9.33□□□□□ -0.92
SDF2-204ENST00000587338 PHLPP2Q6ZVD8 1323 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 STK36Q9NRP7 1315 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 BPTFQ12830 3046 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 EML5Q05BV3 1969 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 WNT7AO00755 349 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
SDF2-204ENST00000587338 LARGE1O95461 756 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 FGF19O95750 216 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 EGFP01133 1207 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 CSRP1P21291 193 aaKnown RBP9.32□□□□□ -0.92
SDF2-204ENST00000587338 SCRN1Q12765 414 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 ME3Q16798 604 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 CYP2U1Q7Z449 544 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 DNAJB7Q7Z6W7 309 aaPredicted RBP9.32□□□□□ -0.92
SDF2-204ENST00000587338 USP37Q86T82 979 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 CAMKK1Q8N5S9 505 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 TTC9BQ8N6N2 239 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 ATAD1Q8NBU5 361 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 DEFB124Q8NES8 71 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 KIFAP3Q92845 792 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 TNFRSF25Q93038 417 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 PSMG2Q969U7 264 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 ACAP3Q96P50 834 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 GCNAQ96QF7 691 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 MTMR9Q96QG7 549 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 ACO2Q99798 780 aaKnown RBP9.32□□□□□ -0.92
SDF2-204ENST00000587338 TCHPQ9BT92 498 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 POLR3CQ9BUI4 534 aaPredicted RBP9.32□□□□□ -0.92
SDF2-204ENST00000587338 EBF3Q9H4W6 596 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 GKN1Q9NS71 199 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 INVSQ9Y283 1065 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 ASB3Q9Y575 518 aa9.32□□□□□ -0.92
SDF2-204ENST00000587338 NUP210Q8TEM1 1887 aaPredicted RBP9.32□□□□□ -0.92
SDF2-204ENST00000587338 KIF26AQ9ULI4 1882 aaPredicted RBP9.32□□□□□ -0.92
SDF2-204ENST00000587338 MTMR11A4FU01 709 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 OR6C75A6NL08 312 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 CCDC169A6NNP5 214 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 PATE3B3GLJ2 98 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 TRDMT1O14717 391 aaKnown RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 KHNYNO15037 678 aaKnown RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 MEFVO15553 781 aaPredicted RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 OAZ2O95190 189 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 APBB3O95704 486 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 MCF2P10911 925 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 U2AF2P26368 475 aaKnown RBP eCLIP9.31□□□□□ -0.92
SDF2-204ENST00000587338 CDR1P51861 262 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 DGKEP52429 567 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 GPR17Q13304 367 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 RUNX3Q13761 415 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 TRIM68Q6AZZ1 485 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 CENPPQ6IPU0 288 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 ITIH5Q86UX2 942 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 TMEM130Q8N3G9 435 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 RPLP0P6Q8NHW5 317 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 ERMNQ8TAM6 284 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 WASF1Q92558 559 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 SEPT5Q99719 369 aaPredicted RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 LPIN3Q9BQK8 851 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 TARS2Q9BW92 718 aaKnown RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 MRPL4Q9BYD3 311 aaKnown RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 TMEM60Q9H2L4 133 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 TASP1Q9H6P5 420 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 PTPRHQ9HD43 1115 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 HPS4Q9NQG7 708 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 ANKFY1Q9P2R3 1169 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 ORC3Q9UBD5 711 aaPredicted RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 SMC3Q9UQE7 1217 aa9.31□□□□□ -0.92
SDF2-204ENST00000587338 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 ASCC3Q8N3C0 2202 aaKnown RBP9.31□□□□□ -0.92
SDF2-204ENST00000587338 OTOL1A6NHN0 477 aaPredicted RBP9.3□□□□□ -0.92
SDF2-204ENST00000587338 M0QZQ0 153 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 CDX4O14627 284 aaPredicted RBP9.3□□□□□ -0.92
SDF2-204ENST00000587338 ARSAP15289 507 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 CDC25CP30307 473 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 MCM7P33993 719 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 FOSBP53539 338 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 PEX3P56589 373 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 SPAG1Q07617 926 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 PSMD2Q13200 908 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 CUL4AQ13619 759 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 DMC1Q14565 340 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 VEPH1Q14D04 833 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 SEZ6Q53EL9 994 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 PMS2CLQ68D20 193 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 NAIF1Q69YI7 327 aaPredicted RBP9.3□□□□□ -0.92
SDF2-204ENST00000587338 MPZL3Q6UWV2 235 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 DSTYKQ6XUX3 929 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 ABCA7Q8IZY2 2146 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 ACDQ96AP0 544 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 CHFRQ96EP1 664 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 P2RY13Q9BPV8 354 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 FAM83CQ9BQN1 747 aa9.3□□□□□ -0.92
SDF2-204ENST00000587338 OXCT2Q9BYC2 517 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms