RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 PPP1R10Q96QC0 940 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 NFKBIZQ9BYH8 718 aa13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 TASP1Q9H6P5 420 aa13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 BCCIPQ9P287 314 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 DNMT3LQ9UJW3 386 aa13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 RCAN3Q9UKA8 241 aa13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 PCOLCE2Q9UKZ9 415 aa13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 GDAQ9Y2T3 454 aa13.93□□□□□ -0.18
SMARCA4-211ENST00000586921 AP5Z1O43299 807 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 MARCH6O60337 910 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 YWHABP31946 246 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 GJA4P35212 333 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 ALDH1A3P47895 512 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 SEC13P55735 322 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 CYP4F8P98187 520 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 CRY1Q16526 586 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 TMEM132AQ24JP5 1023 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 C2orf27AQ580R0 203 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 XKR9Q5GH70 373 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 CC2D1AQ6P1N0 951 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 NOSTRINQ8IVI9 506 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 CPA6Q8N4T0 437 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 CCDC33Q8N5R6 958 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 CCDC12Q8WUD4 166 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 WRAP73Q9P2S5 460 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 MMP17Q9ULZ9 603 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 PLXND1Q9Y4D7 1925 aa13.92□□□□□ -0.18
SMARCA4-211ENST00000586921 KNTC1P50748 2209 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 N4BP3O15049 544 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 EDIL3O43854 480 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 SLC28A2O43868 658 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 GNA11P29992 359 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 CSRP3P50461 194 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 USP11P51784 963 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 RPL6Q02878 288 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 RTN1Q16799 776 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 MAP7D1Q3KQU3 841 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 DNAJB7Q7Z6W7 309 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 SETD7Q8WTS6 366 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 PSMG2Q969U7 264 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 PGLYRP2Q96PD5 576 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 PNMA5Q96PV4 448 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 GCNAQ96QF7 691 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 PDZD7Q9H5P4 517 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 XPNPEP1Q9NQW7 623 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 TOR4AQ9NXH8 423 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 ASB3Q9Y575 518 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 COL5A1P20908 1838 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-211ENST00000586921 UBR5O95071 2799 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 CEP192Q8TEP8 1941 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 E9PAM4 449 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 EML1O00423 815 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 BFSP1Q12934 665 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 PDGFRLQ15198 375 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 PLEKHG6Q3KR16 790 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 Q4G0T1 1027 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 CMTM8Q8IZV2 173 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 DEFB119Q8N690 84 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 BICD2Q8TD16 824 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 PRIMPOLQ96LW4 560 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 ADPGKQ9BRR6 497 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 PI4K2AQ9BTU6 479 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 LRRC2Q9BYS8 371 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 CCL26Q9Y258 94 aa13.9□□□□□ -0.18
SMARCA4-211ENST00000586921 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 PODXLO00592 558 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 DKK1O94907 266 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 VNN2O95498 520 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 ATXN1LP0C7T5 689 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 C6P13671 934 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 GLRA2P23416 452 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 AVPR1AP37288 418 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 ZNF33AQ06730 810 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 DUSP4Q13115 394 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 COLEC12Q5KU26 742 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 ITIH5Q86UX2 942 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 APPL2Q8NEU8 664 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 ETNPPLQ8TBG4 499 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 HMGB4Q8WW32 186 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 BAP1Q92560 729 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 LXNQ9BS40 222 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 SLC46A2Q9BY10 475 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 CRISPLD1Q9H336 500 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 OSBPL3Q9H4L5 887 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 ECT2Q9H8V3 914 aa13.89□□□□□ -0.19
SMARCA4-211ENST00000586921 PRMT7Q9NVM4 692 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms