RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 UVRAGQ9P2Y5 699 aa11.09□□□□□ -0.63
LIG3-203ENST00000585370 TRPV2Q9Y5S1 764 aa11.09□□□□□ -0.63
LIG3-203ENST00000585370 GRID2IPA4D2P6 1211 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 EPOPA6NHQ4 379 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 TNFRSF10AO00220 468 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 ENC1O14682 589 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 MED7O43513 233 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 CLSTN1O94985 981 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 ARHGEF15O94989 841 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 NPTXRO95502 500 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 CYP1A1P04798 512 aaPredicted RBP11.08□□□□□ -0.64
LIG3-203ENST00000585370 CYP1A2P05177 515 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 MMEP08473 750 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 PAEPP09466 180 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 ZNF132P52740 706 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 MRPS5P82675 430 aaKnown RBP11.08□□□□□ -0.64
LIG3-203ENST00000585370 MYO1EQ12965 1108 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 BFSP2Q13515 415 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 HIC1Q14526 733 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 CLUL1Q15846 466 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 TAF3Q5VWG9 929 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 SPOPLQ6IQ16 392 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 TMEM270Q6UE05 265 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 ZNF572Q7Z3I7 529 aaPredicted RBP11.08□□□□□ -0.64
LIG3-203ENST00000585370 SERINC5Q86VE9 423 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 CDR2LQ86X02 465 aaPredicted RBP11.08□□□□□ -0.64
LIG3-203ENST00000585370 HACE1Q8IYU2 909 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 LRRC57Q8N9N7 239 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 RBBP8NLQ8NC74 664 aaPredicted RBP11.08□□□□□ -0.64
LIG3-203ENST00000585370 BEST2Q8NFU1 509 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 PHOSPHO2Q8TCD6 241 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 ANKRD7Q92527 254 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 OSBPL9Q96SU4 736 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 SLC9A7Q96T83 725 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 PCDHB18PQ96TA0 734 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 TLR10Q9BXR5 811 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 BCO2Q9BYV7 579 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 DNAI2Q9GZS0 605 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 XYLT2Q9H1B5 865 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 CERS4Q9HA82 394 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 CDHR5Q9HBB8 845 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.64
LIG3-203ENST00000585370 DPP3Q9NY33 737 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 THEGQ9P2T0 379 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 LCMT1Q9UIC8 334 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 GTF3C4Q9UKN8 822 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 AMFRQ9UKV5 643 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 GINS2Q9Y248 185 aa11.08□□□□□ -0.64
LIG3-203ENST00000585370 TMCO5BA8MYB1 307 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 GPR182O15218 404 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 CAND2O75155 1236 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 LSM8O95777 96 aaKnown RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 NFICP08651 508 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 KRT19P08727 400 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 UNGP13051 313 aaPredicted RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 POU3F3P20264 500 aaPredicted RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 GNA15P30679 374 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 ZNF200P98182 395 aaPredicted RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 TMEM62Q0P6H9 643 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 CFAP221Q4G0U5 840 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 LIN9Q5TKA1 542 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 CCDC70Q6NSX1 233 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 ALKAL1Q6UXT8 129 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 PEX26Q7Z412 305 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 HERC6Q8IVU3 1022 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 TMEM192Q8IY95 271 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 C1orf127Q8N9H9 656 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 CAGE1Q8TC20 777 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 RPS6KC1Q96S38 1066 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 THAP2Q9H0W7 228 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 ABCB6Q9NP58 842 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 AVENQ9NQS1 362 aaPredicted RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 CISHQ9NSE2 258 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 ARGLU1Q9NWB6 273 aaPredicted RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 TAS2R14Q9NYV8 317 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 CNTN3Q9P232 1028 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 CTTNBP2NLQ9P2B4 639 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 SIX4Q9UIU6 781 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 UBQLN1Q9UMX0 589 aaKnown RBP11.07□□□□□ -0.64
LIG3-203ENST00000585370 CEP83Q9Y592 693 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 SQORQ9Y6N5 450 aa11.07□□□□□ -0.64
LIG3-203ENST00000585370 MIF4GDA9UHW6 222 aaKnown RBP11.06□□□□□ -0.64
LIG3-203ENST00000585370 NBNO60934 754 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 BAIAP3O94812 1187 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 KIF4AO95239 1232 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 FAM163BP0C2L3 166 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 KCNE1P15382 129 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 SELPP16109 830 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 CYP3A5P20815 502 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 ABCB4P21439 1286 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 FGFR4P22455 802 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 MCM3P25205 808 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 PNPLA4P41247 253 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 NSFP46459 744 aaKnown RBP11.06□□□□□ -0.64
LIG3-203ENST00000585370 CENPCQ03188 943 aa11.06□□□□□ -0.64
LIG3-203ENST00000585370 TAP1Q03518 808 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms