RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 RBP5P82980 135 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 CYP24A1Q07973 514 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 DPYDQ12882 1025 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 STK4Q13043 487 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 KCNB1Q14721 858 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 PSMD6Q15008 389 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 NFIL3Q16649 462 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 KMT5BQ4FZB7 885 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 CBWD2Q8IUF1 395 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 SUGP1Q8IWZ8 645 aaKnown RBP10.66□□□□□ -0.7
SKA2-208ENST00000583927 NPAS3Q8IXF0 933 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 GRAMD1CQ8IYS0 662 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 THEM5Q8N1Q8 247 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 SLC44A3Q8N4M1 653 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 CSGALNACT2Q8N6G5 542 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 TOP6BLQ8N6T0 577 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 KIAA0895Q8NCT3 520 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 SPPL2BQ8TCT7 592 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 CCDC34Q96HJ3 373 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 ZNF512Q96ME7 567 aaPredicted RBP10.66□□□□□ -0.7
SKA2-208ENST00000583927 RTP3Q9BQQ7 232 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 KCTD10Q9H3F6 313 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 SLC2A4RGQ9NR83 387 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 EXOC1Q9NV70 894 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 HCFC1R1Q9NWW0 138 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 POLIQ9UNA4 740 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 AGAP1Q9UPQ3 857 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 FANCMQ8IYD8 2048 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 COL4A2P08572 1712 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 HELZP42694 1942 aaKnown RBP10.66□□□□□ -0.7
SKA2-208ENST00000583927 WDR87Q6ZQQ6 2873 aa10.66□□□□□ -0.7
SKA2-208ENST00000583927 TICRRQ7Z2Z1 1910 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 GABRDO14764 452 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 MAPK13O15264 365 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 ZNF202O95125 648 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.7
SKA2-208ENST00000583927 TNNC2P02585 160 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 RPN1P04843 607 aaKnown RBP10.65□□□□□ -0.7
SKA2-208ENST00000583927 TUFMP49411 452 aaKnown RBP10.65□□□□□ -0.7
SKA2-208ENST00000583927 CLCN5P51795 746 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 NTHL1P78549 312 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 ENPEPQ07075 957 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 TWF1Q12792 350 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 MYO1EQ12965 1108 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 DUSP4Q13115 394 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 SLC5A9Q2M3M2 681 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 WSCD1Q658N2 575 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 IQCEQ6IPM2 695 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 KRBA2Q6ZNG9 492 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 NELFCDQ8IXH7 590 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 FSIP1Q8NA03 581 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 OR10T2Q8NGX3 314 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 ITFG1Q8TB96 612 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 CCDC47Q96A33 483 aaKnown RBP10.65□□□□□ -0.7
SKA2-208ENST00000583927 CHAMP1Q96JM3 812 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 CGRRF1Q99675 332 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 ACBD6Q9BR61 282 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 LRRC3Q9BY71 257 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 MTMR12Q9C0I1 747 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 GPR88Q9GZN0 384 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 CEP72Q9P209 647 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 MRPS23Q9Y3D9 190 aaKnown RBP10.65□□□□□ -0.7
SKA2-208ENST00000583927 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
SKA2-208ENST00000583927 CACNA1IQ9P0X4 2223 aa10.65□□□□□ -0.71
SKA2-208ENST00000583927 PTPRJQ12913 1337 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 PATJQ8NI35 1801 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 CLIC2O15247 247 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 HUS1O60921 280 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 ECI2O75521 394 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 FGF19O95750 216 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 ALDH1A3P47895 512 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 LHX1P48742 406 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 AP3M2P53677 418 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 EPHB3P54753 998 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 MCCD1P59942 119 aaPredicted RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 NFE2Q16621 373 aaPredicted RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 CYP4A22Q5TCH4 519 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 PDZD4Q76G19 769 aaPredicted RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 TRAPPC11Q7Z392 1133 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 ELOA2Q8IYF1 753 aaPredicted RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 DCP1BQ8IZD4 617 aaKnown RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 GUF1Q8N442 669 aaKnown RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 PDCL2Q8N4E4 241 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 OR5B17Q8NGF7 314 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 PARD3BQ8TEW8 1205 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 FGF14Q92915 247 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 PSMG2Q969U7 264 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 FNBP1Q96RU3 617 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 TMEM209Q96SK2 561 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 CORO1BQ9BR76 489 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 DNAJC25Q9H1X3 360 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 CRISPLD1Q9H336 500 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 GOLPH3LQ9H4A5 285 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 TRPV4Q9HBA0 871 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 ABCB6Q9NP58 842 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 ASAH2Q9NR71 780 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 ZMYM5Q9UJ78 669 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms