RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 RFXAPO00287 272 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-216ENST00000583804 SYN3O14994 580 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 URODP06132 367 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 CD58P19256 250 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 FGFR3P22607 806 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 KRT9P35527 623 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 ARID5AQ03989 594 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 UBE3AQ05086 875 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 CUL2Q13617 745 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 BMS1Q14692 1282 aaKnown RBP11.71□□□□□ -0.53
TOP3A-216ENST00000583804 HABP4Q5JVS0 413 aaKnown RBP11.71□□□□□ -0.53
TOP3A-216ENST00000583804 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
TOP3A-216ENST00000583804 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 TMC7Q7Z402 723 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 ADGRF2Q8IZF7 708 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 TOP6BLQ8N6T0 577 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-216ENST00000583804 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 MRPL45Q9BRJ2 306 aaKnown RBP11.71□□□□□ -0.53
TOP3A-216ENST00000583804 HERC2P3Q9BVR0 1158 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 SNX25Q9H3E2 840 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 KCNF1Q9H3M0 494 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 ENTPD7Q9NQZ7 604 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 DSEQ9UL01 958 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 LZTS1Q9Y250 596 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 SCN1AP35498 2009 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 KIAA1671Q9BY89 1806 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 EPOPA6NHQ4 379 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 LRRC53A6NM62 1247 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CXCL14O95715 111 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CALCAP01258 141 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TBXAS1P24557 533 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 DNAJB1P25685 340 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 USP8P40818 1118 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 ASPAP45381 313 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 GLUD2P49448 558 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 ERVFC1P60507 584 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 YWHAHQ04917 246 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 RTP2Q5QGT7 225 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 E4F1Q66K89 784 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 OVOS1Q6IE37 1185 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 DPY19L2P1Q6NXN4 242 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 DPH6Q7L8W6 267 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 THEM5Q8N1Q8 247 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TC2NQ8N9U0 490 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 OR6B3Q8NGW1 331 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 GDPD5Q8WTR4 605 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 AUTS2Q8WXX7 1259 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 ARID3AQ99856 593 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TCF25Q9BQ70 676 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TTYH3Q9C0H2 523 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 SDCBP2Q9H190 292 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CYP3A43Q9HB55 503 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 PLCB1Q9NQ66 1216 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TLR9Q9NR96 1032 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CHST7Q9NS84 486 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 LPXNO60711 386 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 EFEMP2O95967 443 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CYP11A1P05108 521 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 UCHL3P15374 230 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TYMPP19971 482 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 GNL1P36915 607 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 LHX1P48742 406 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 MFAP3P55082 362 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 DSG1Q02413 1049 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TRIM14Q14142 442 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CTXN3Q4LDR2 81 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 KIAA0319Q5VV43 1072 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 PLPP4Q5VZY2 271 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 PDXDC1Q6P996 788 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 PRSS55Q6UWB4 352 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 ENOSF1Q7L5Y1 443 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 OSTM1Q86WC4 334 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 RNF168Q8IYW5 571 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 TMEM86AQ8N2M4 240 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 FAXDC2Q96IV6 333 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 FAM81BQ96LP2 452 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 KREMEN1Q96MU8 473 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 FAM161BQ96MY7 647 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 SPAG5Q96R06 1193 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 NUP58Q9BVL2 599 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 BCO2Q9BYV7 579 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 ZBP1Q9H171 429 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 MRPL17Q9NRX2 175 aaKnown RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CISHQ9NSE2 258 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 ABHD10Q9NUJ1 306 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 DDX43Q9NXZ2 648 aaKnown RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CEP72Q9P209 647 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 CAPN11Q9UMQ6 739 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 SSX2IPQ9Y2D8 614 aa11.7□□□□□ -0.54
TOP3A-216ENST00000583804 LUC7L2Q9Y383 392 aaKnown RBP11.7□□□□□ -0.54
TOP3A-216ENST00000583804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms