RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 AARSP49588 968 aaKnown RBP eCLIP22.22■■□□□ 1.15
SRSF1-206ENST00000583741 MCL1Q07820 350 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 DUSP4Q13115 394 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 ZPBP2Q6X784 338 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 Q6ZS52 159 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 GPIHBP1Q8IV16 184 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 TIPINQ9BVW5 301 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 GPR88Q9GZN0 384 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 GOLPH3LQ9H4A5 285 aa22.22■■□□□ 1.15
SRSF1-206ENST00000583741 A0A1B0GVL5 298 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 TTC26A0AVF1 554 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 CLDN3O15551 220 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 KRT37O76014 449 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 TNFSF9P41273 254 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 GUCY2FP51841 1108 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 MLLT6P55198 1093 aaPredicted RBP22.21■■□□□ 1.15
SRSF1-206ENST00000583741 FCHO2Q0JRZ9 810 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 SRSF5Q13243 272 aaKnown RBP22.21■■□□□ 1.15
SRSF1-206ENST00000583741 ZRSR1Q15695 479 aaKnown RBP22.21■■□□□ 1.15
SRSF1-206ENST00000583741 ZBTB6Q15916 424 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 TXNDC11Q6PKC3 985 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 CSGALNACT1Q8TDX6 532 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 LRRC3BQ96PB8 259 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 MKNK1Q9BUB5 465 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 FAM13BQ9NYF5 915 aa22.21■■□□□ 1.15
SRSF1-206ENST00000583741 CHURC1-FNTBB4DL54 471 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 CHADO15335 359 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 HRO43593 1189 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 RETP07949 1114 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 PFKFB1P16118 471 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 FNTBP49356 437 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 FAM160A1Q05DH4 1040 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 GPR17Q13304 367 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 ARID3BQ8IVW6 561 aaPredicted RBP22.2■■□□□ 1.14
SRSF1-206ENST00000583741 SPEM1Q8N4L4 309 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 E2F7Q96AV8 911 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 KIF12Q96FN5 646 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 PNMA5Q96PV4 448 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 PLEKHA5Q9HAU0 1116 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 C2orf42Q9NWW7 574 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 SLC27A5Q9Y2P5 690 aa22.2■■□□□ 1.14
SRSF1-206ENST00000583741 K7ESF4 209 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 HOXC13P31276 330 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 EPHB3P54753 998 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 PLD1Q13393 1074 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 SIM2Q14190 667 aaPredicted RBP22.19■■□□□ 1.14
SRSF1-206ENST00000583741 GAREM2Q75VX8 874 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 YAF2Q8IY57 180 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 TTC9BQ8N6N2 239 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 ZFYVE19Q96K21 471 aa22.19■■□□□ 1.14
SRSF1-206ENST00000583741 UBQLN1Q9UMX0 589 aaKnown RBP22.19■■□□□ 1.14
SRSF1-206ENST00000583741 USP24Q9UPU5 2620 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 NPHP3-ACAD11A0A0J9YXS1 232 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 FAM237AA0A1B0GTK4 181 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 OR6C75A6NL08 312 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 PPEF2O14830 753 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 SOAT2O75908 522 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 CLTAP09496 248 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 MATR3P43243 847 aaKnown RBP eCLIP22.18■■□□□ 1.14
SRSF1-206ENST00000583741 NDUFA8P51970 172 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 KPNA1P52294 538 aaPredicted RBP22.18■■□□□ 1.14
SRSF1-206ENST00000583741 SMTNP53814 917 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 CACNB1Q02641 598 aaPredicted RBP22.18■■□□□ 1.14
SRSF1-206ENST00000583741 CENPPQ6IPU0 288 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 USP37Q86T82 979 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 SYT2Q8N9I0 419 aaPredicted RBP22.18■■□□□ 1.14
SRSF1-206ENST00000583741 ATAD1Q8NBU5 361 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 TTC8Q8TAM2 541 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 MSANTD3Q96H12 275 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 EPSTI1Q96J88 318 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 AK8Q96MA6 479 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 TMEM209Q96SK2 561 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 PLIN2Q99541 437 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 OXCT2Q9BYC2 517 aaPredicted RBP22.18■■□□□ 1.14
SRSF1-206ENST00000583741 SEMA4GQ9NTN9 838 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 GTSE1Q9NYZ3 720 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 HPSEQ9Y251 543 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 CFAP47Q6ZTR5 3102 aa22.18■■□□□ 1.14
SRSF1-206ENST00000583741 CNOT1A5YKK6 2376 aaKnown RBP22.18■■□□□ 1.14
SRSF1-206ENST00000583741 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.17■■□□□ 1.14
SRSF1-206ENST00000583741 MTMR11A4FU01 709 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 SPECC1L-ADORA2AF8WAN1 911 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 FAM189A1O60320 539 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 LRP3O75074 770 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 PAPSS2O95340 614 aaPredicted RBP22.17■■□□□ 1.14
SRSF1-206ENST00000583741 CYP3A5P20815 502 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 CTHP32929 405 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 SLC12A3P55017 1021 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 LRRC32Q14392 662 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 HYIQ5T013 277 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 CAVIN1Q6NZI2 390 aaKnown RBP22.17■■□□□ 1.14
SRSF1-206ENST00000583741 DSTYKQ6XUX3 929 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 USP49Q70CQ1 688 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 ENGASEQ8NFI3 743 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 NETO1Q8TDF5 533 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 SYAP1Q96A49 352 aaPredicted RBP22.17■■□□□ 1.14
SRSF1-206ENST00000583741 C8orf33Q9H7E9 229 aaPredicted RBP22.17■■□□□ 1.14
SRSF1-206ENST00000583741 SDK1Q7Z5N4 2213 aa22.17■■□□□ 1.14
SRSF1-206ENST00000583741 LAMA1P25391 3075 aa22.16■■□□□ 1.14
SRSF1-206ENST00000583741 MYBPHLA2RUH7 354 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms