RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ANO10Q9NW15 660 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 KCND2Q9NZV8 630 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SERTAD1Q9UHV2 236 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 RAB23Q9ULC3 237 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 USP18Q9UMW8 372 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 UBQLN1Q9UMX0 589 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 USP34Q70CQ2 3546 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SPTBN4Q9H254 2564 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 COL4A2P08572 1712 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 OTOGLQ3ZCN5 2332 aa10.52□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MYH11P35749 1972 aa10.52□□□□□ -0.72
CDK5RAP3-227ENST00000583352 OR6C75A6NL08 312 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 HEPACAM2A8MVW5 462 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 NRG2O14511 850 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 AP5Z1O43299 807 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SLFN14P0C7P3 912 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CYP3A5P20815 502 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LONP1P36776 959 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 EPHB3P54753 998 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 NLRP12P59046 1061 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PPP2R3AQ06190 1150 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SPAG1Q07617 926 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 STX1AQ16623 288 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 KYAT1Q16773 422 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 HYIQ5T013 277 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 C1orf228Q6PIY5 440 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SYT2Q8N9I0 419 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 BEST2Q8NFU1 509 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SHKBP1Q8TBC3 707 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 MSANTD3Q96H12 275 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PGLYRP2Q96PD5 576 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PNMA5Q96PV4 448 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LARSQ9P2J5 1176 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 USP25Q9UHP3 1055 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TIMM13Q9Y5L4 95 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TICRRQ7Z2Z1 1910 aa10.52□□□□□ -0.73
CDK5RAP3-227ENST00000583352 A0A1W2PRU2 124 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TTC26A0AVF1 554 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 VWA3AA6NCI4 1184 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CHADO15335 359 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 OR4Q2P0C623 313 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PLA2G4BP0C869 781 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TDGF1P13385 188 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TYMPP19971 482 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CCNE1P24864 410 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 ALDH1A3P47895 512 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CXCL12P48061 93 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 AARSP49588 968 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 ZNF165P49910 485 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LIG4P49917 911 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 ATXN1P54253 815 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 NCKAP1LP55160 1127 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 MLLT6P55198 1093 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 GPR17Q13304 367 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LRRC32Q14392 662 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 E2F4Q16254 413 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LAIR1Q6GTX8 287 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 OVOS1Q6IE37 1185 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 C11orf57Q6ZUT1 292 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CELF5Q8N6W0 485 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SPATA20Q8TB22 786 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TSPAN18Q96SJ8 248 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PLIN2Q99541 437 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LRRC3Q9BY71 257 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 DNAJC25Q9H1X3 360 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 C8orf33Q9H7E9 229 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 RPF1Q9H9Y2 349 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PCDHA5Q9Y5H7 936 aa10.51□□□□□ -0.73
CDK5RAP3-227ENST00000583352 NPHP3-ACAD11A0A0J9YXS1 232 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LACTBL1A8MY62 500 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 DPYSL4O14531 572 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 VNN2O95498 520 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 FGF19O95750 216 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CHRNB1P11230 501 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SCP2P22307 547 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TNFSF9P41273 254 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 KPNA1P52294 538 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SLC12A3P55017 1021 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CACNB1Q02641 598 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 DUSP4Q13115 394 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PNOCQ13519 176 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 MYBPC2Q14324 1141 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 ZBTB6Q15916 424 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LPAL2Q16609 132 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 ARHGAP15Q53QZ3 475 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 CENPPQ6IPU0 288 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 ARMCX5Q6P1M9 558 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PRR23BQ6ZRT6 265 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 HAUS6Q7Z4H7 955 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 LUZP1Q86V48 1076 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TMC8Q8IU68 726 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 DHX40Q8IX18 779 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 TMEM130Q8N3G9 435 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 SPEM1Q8N4L4 309 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 ANP32BQ92688 251 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 PAGE5Q96GU1 130 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 BPIFA3Q9BQP9 254 aa10.5□□□□□ -0.73
CDK5RAP3-227ENST00000583352 RTKNQ9BST9 563 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms