RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 DCLK3Q9C098 648 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 LAMA4Q16363 1823 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 GMNNO75496 209 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 ACSL3O95573 720 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 TXNP10599 105 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 CHN1P15882 459 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 CLNS1AP54105 237 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 VCPP55072 806 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 ZNF211Q13398 564 aaPredicted RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 CYP4F22Q6NT55 531 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 CBWD2Q8IUF1 395 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 SUGP1Q8IWZ8 645 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 PARP9Q8IXQ6 854 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 CEP120Q8N960 986 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 ART4Q93070 314 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 VPS39Q96JC1 886 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 HACL1Q9UJ83 578 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 NOD1Q9Y239 953 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 TUBGCP6Q96RT7 1819 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 GIPC1O14908 333 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 NOL4O94818 638 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 HAUS5O94927 633 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 SRGAP2CP0DJJ0 459 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 GLI3P10071 1580 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 NR2C2P49116 596 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 PDIA2Q13087 525 aaKnown RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 TBC1D10BQ4KMP7 808 aaPredicted RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 TAF1BQ53T94 588 aaPredicted RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 UIMC1Q96RL1 719 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 LHX5Q9H2C1 402 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 KLC4Q9NSK0 619 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 LRRC4BQ9NT99 713 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 TLK1Q9UKI8 766 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 PACSIN2Q9UNF0 486 aaPredicted RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 TNFSF13BQ9Y275 285 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 CLUHO75153 1309 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 WNT10BO00744 389 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 TRDMT1O14717 391 aaKnown RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 PPP1R11O60927 126 aaPredicted RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 MAFO75444 373 aaPredicted RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 TCEA3O75764 348 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 PPARGP37231 505 aaPredicted RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 SKIV2L2P42285 1042 aaKnown RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 AIF1P55008 147 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 MAPRE2Q15555 327 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 CYP1B1Q16678 543 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 HIBCHQ6NVY1 386 aaPredicted RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 CASC4Q6P4E1 433 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 TRPM8Q7Z2W7 1104 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 ZBTB33Q86T24 672 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 ARHGAP18Q8N392 663 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 ZCCHC9Q8N567 271 aaKnown RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 CATSPER1Q8NEC5 780 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 ELAC2Q9BQ52 826 aaKnown RBP6.15□□□□□ -1.43
RTTN-209ENST00000583043 DUSP10Q9Y6W6 482 aa6.15□□□□□ -1.43
RTTN-209ENST00000583043 MYH7P12883 1935 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 DNALI1O14645 258 aaPredicted RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 SNRPAP09012 282 aaKnown RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 ITGA8P53708 1063 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 EIF3EP60228 445 aaKnown RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 ACTN3Q08043 901 aaPredicted RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 SPIRE1Q08AE8 756 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 RASA2Q15283 850 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 ARMC3Q5W041 872 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 RAB44Q7Z6P3 723 aaPredicted RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 GPRC5AQ8NFJ5 357 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 RAB3IL1Q8TBN0 382 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 NUP98P52948 1817 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 SGPL1O95470 568 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 SYF2O95926 243 aaKnown RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 KRT10P13645 584 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 HOXB8P17481 243 aaPredicted RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 CD58P19256 250 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 TAC1P20366 129 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 PTPN7P35236 360 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 VPS41P49754 854 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 NAA20P61599 178 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 ZNF844Q08AG5 666 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 GRIK5Q16478 980 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 NOTUMQ6P988 496 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 SPOCD1Q6ZMY3 1216 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 TEX9Q8N6V9 391 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 C2orf69Q8N8R5 385 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 SH3TC2Q8TF17 1288 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 TRIM51Q9BSJ1 452 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 EFHD1Q9BUP0 239 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 ERI2A8K979 691 aaKnown RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 WNT7AO00755 349 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 TRAPPC3O43617 180 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 TLR2O60603 784 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 DNAJC8O75937 253 aaPredicted RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 ARFIP2P53365 341 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 SLC18A1P54219 525 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 FAM102AQ5T9C2 384 aaPredicted RBP6.14□□□□□ -1.43
RTTN-209ENST00000583043 RHPN2Q8IUC4 686 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 SLC30A5Q8TAD4 765 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 TAS1R2Q8TE23 839 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 PGBD4Q96DM1 585 aa6.14□□□□□ -1.43
RTTN-209ENST00000583043 NLRP4Q96MN2 994 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms