RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	WSCD1	Q658N2	575 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CD302	Q8IX05	232 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	EFCAB13	Q8IY85	973 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ZSWIM2	Q8NEG5	633 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GIPC2	Q8TF65	315 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	NOC3L	Q8WTT2	800 aa	Known RBP	12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	PSMG2	Q969U7	264 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	FAM84A	Q96KN4	292 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	LRRC3B	Q96PB8	259 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	MKNK1	Q9BUB5	465 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CCSER1	Q9C0I3	900 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SMG9	Q9H0W8	520 aa	Known RBP	12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CHRD	Q9H2X0	955 aa		12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	RBM12	Q9NTZ6	932 aa	Known RBP	12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SMG5	Q9UPR3	1016 aa	Known RBP	12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.58	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	OTOGL	Q3ZCN5	2332 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GPR179	Q6PRD1	2367 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	F5	P12259	2224 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TCHH	Q07283	1943 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	MYMK	A6NI61	221 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ARNTL	O00327	626 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	DPYSL4	O14531	572 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	PRAMEF12	O95522	483 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SCP2	P22307	547 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ADSS	P30520	456 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TAF6	P49848	677 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	WNT7B	P56706	349 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SATB1	Q01826	763 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	PTPA	Q15257	358 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	RRAGB	Q5VZM2	374 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SLFN12L	Q6IEE8	588 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ZNF720	Q7Z2F6	126 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ERMP1	Q7Z2K6	904 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	DGLUCY	Q7Z3D6	616 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	LRRTM3	Q86VH5	581 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	METTL23	Q86XA0	190 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ZBTB44	Q8NCP5	570 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	STKLD1	Q8NE28	680 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SAAL1	Q96ER3	474 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TSPAN18	Q96SJ8	248 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	FAM213A	Q9BRX8	229 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	PANK2	Q9BZ23	570 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GPR88	Q9GZN0	384 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ZCWPW1	Q9H0M4	648 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ASB7	Q9H672	318 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	MRPL44	Q9H9J2	332 aa	Known RBP	12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	FOXD4L1	Q9NU39	408 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ABI2	Q9NYB9	513 aa	Predicted RBP	12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	FBXO2	Q9UK22	296 aa	Predicted RBP	12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	DERA	Q9Y315	318 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	C2CD2	Q9Y426	696 aa		12.57	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	MED19	A0JLT2	244 aa	Predicted RBP	12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CHAD	O15335	359 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GCNT3	O95395	438 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CYP11A1	P05108	521 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CHRNB1	P11230	501 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	IDE	P14735	1019 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ATF6	P18850	670 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CASP5	P51878	434 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TFAM	Q00059	246 aa	Known RBP	12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TNK2	Q07912	1038 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GAS6	Q14393	721 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	VEPH1	Q14D04	833 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TAF12	Q16514	161 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ARHGAP15	Q53QZ3	475 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	WDR44	Q5JSH3	913 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SCARA3	Q6AZY7	606 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TXNDC11	Q6PKC3	985 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114		Q6ZS52	159 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ITIH5	Q86UX2	942 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	THEM5	Q8N1Q8	247 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	FGFBP2	Q9BYJ0	223 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TRPV5	Q9NQA5	729 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GTSE1	Q9NYZ3	720 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CCDC39	Q9UFE4	941 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	DSE	Q9UL01	958 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ASB3	Q9Y575	518 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	STYXL1	Q9Y6J8	313 aa		12.56	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GOLGA8IP	A6NC78	632 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GOLGA8J	A6NMD2	632 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	KPNA7	A9QM74	516 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SPECC1L-ADORA2A	F8WAN1	911 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	LILRB5	O75023	590 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	PPP1R37	O75864	691 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TDGF1	P13385	188 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	POLR2B	P30876	1174 aa	Known RBP	12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	HOXC13	P31276	330 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	ABCD1	P33897	745 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	TUFM	P49411	452 aa	Known RBP	12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	GPR15	P49685	360 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CCR3	P51677	355 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	DMWD	Q09019	674 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	FCHO2	Q0JRZ9	810 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	REST	Q13127	1097 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	CUL4A	Q13619	759 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	PON2	Q15165	354 aa		12.55	□□□□□ -0.4
CDK5RAP3-223	ENST00000582114	SV2C	Q496J9	727 aa		12.55	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms