RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ADAMTS1Q9UHI8 967 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 A0A087X0T9 212 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-204ENST00000581979 HOXA2O43364 376 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 KRT86O43790 486 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 KIF5CO60282 957 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 KRT19P08727 400 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 FAM228BP0C875 321 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 FGFR1P11362 822 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 IBSPP21815 317 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-204ENST00000581979 GNG11P61952 73 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 ETF1P62495 437 aaKnown RBP13.46□□□□□ -0.25
SRSF1-204ENST00000581979 UBE3AQ05086 875 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 KIF5AQ12840 1032 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 ECHDC2Q86YB7 292 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 SHC3Q92529 594 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 TSGA10Q9BZW7 698 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 APOBEC3GQ9HC16 384 aaKnown RBP13.46□□□□□ -0.25
SRSF1-204ENST00000581979 RNF19AQ9NV58 838 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 CLDND1Q9NY35 253 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 GUCA1BQ9UMX6 200 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 TFR2Q9UP52 801 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
SRSF1-204ENST00000581979 A0A0U1RQF3 1178 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-204ENST00000581979 IL9P15248 144 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 TNFAIP3P21580 790 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 TBXAS1P24557 533 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-204ENST00000581979 ARHGAP25P42331 645 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 MYL6P60660 151 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 CUL2Q13617 745 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 BMS1Q14692 1282 aaKnown RBP13.45□□□□□ -0.26
SRSF1-204ENST00000581979 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
SRSF1-204ENST00000581979 NT5DC4Q86YG4 428 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 KIF18AQ8NI77 898 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 CASD1Q96PB1 797 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 TRAIPQ9BWF2 469 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 CWH43Q9H720 699 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 PLEKHA5Q9HAU0 1116 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 CHST12Q9NRB3 414 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 SEPT11Q9NVA2 429 aaKnown RBP13.45□□□□□ -0.26
SRSF1-204ENST00000581979 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 R3HCC1Q9Y3T6 440 aaKnown RBP13.45□□□□□ -0.26
SRSF1-204ENST00000581979 HES2Q9Y543 173 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 PLXNA4Q9HCM2 1894 aa13.45□□□□□ -0.26
SRSF1-204ENST00000581979 EOMESO95936 686 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ASS1P00966 412 aaKnown RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 KRT5P13647 590 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 PDCD11Q14690 1871 aaKnown RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ZNF699Q32M78 642 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 UBXN11Q5T124 520 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 C10orf76Q5T2E6 689 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ZNF662Q6ZS27 426 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ZNF598Q86UK7 904 aaKnown RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 COLGALT1Q8NBJ5 622 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 PPP2R3CQ969Q6 453 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 SNX27Q96L92 541 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 AGPAT1Q99943 283 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 NXF3Q9H4D5 531 aaKnown RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 TRIM10Q9UDY6 481 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 C2CD2Q9Y426 696 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 NUB1Q9Y5A7 615 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 RCCD1A6NED2 376 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 CYP26A1O43174 497 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 FGF18O76093 207 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ABL1P00519 1130 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ITGB3P05106 788 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 LAG3P18627 525 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.262e-7■■■□□ 15.1
SRSF1-204ENST00000581979 IRS1P35568 1242 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 PDE6CP51160 858 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 DLX2Q07687 328 aaPredicted RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ADAM15Q13444 863 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ZNF569Q5MCW4 686 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 SCARA3Q6AZY7 606 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 C1orf127Q8N9H9 656 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 ARID3AQ99856 593 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
SRSF1-204ENST00000581979 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 HCSTQ9UBK5 93 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 PARP2Q9UGN5 583 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 FAM50BQ9Y247 325 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 DERAQ9Y315 318 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 PAXBP1Q9Y5B6 917 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 PCDHB4Q9Y5E5 795 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 TRIP11Q15643 1979 aa13.44□□□□□ -0.26
SRSF1-204ENST00000581979 DDX3XO00571 662 aaKnown RBP eCLIP13.43□□□□□ -0.263e-29■■□□□ 14.3
SRSF1-204ENST00000581979 RECQL4O94761 1208 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
SRSF1-204ENST00000581979 AKAP5P24588 427 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 CASQ1P31415 396 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms