RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 CLTCL1P53675 1640 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 E2F8A0AVK6 867 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 FKBP9O95302 570 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 DLGAP3O95886 979 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 NUDT2P50583 147 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 THEMIS2Q5TEJ8 643 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 FKBP9P1Q75LS8 142 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 CCDC60Q8IWA6 550 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 FRMD8P1Q9BZ68 369 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 RIC8BQ9NVN3 520 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 SLC9A1P19634 815 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 NCOA4Q13772 614 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 SYTL3Q4VX76 610 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 EPS8L3Q8TE67 593 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 WNK4Q96J92 1243 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 SPON2Q9BUD6 331 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 ACAD9Q9H845 621 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 TMEM8AQ9HCN3 771 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 HAO1Q9UJM8 370 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 ALG6Q9Y672 507 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 ADGRA3Q8IWK6 1321 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 ATMINO43313 823 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 PSTPIP1O43586 416 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 ATP6V1G2O95670 118 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 ATP6V1B1P15313 513 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 H2AFXP16104 143 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 STK4Q13043 487 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 C6orf10Q5SRN2 563 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 ERGIC2Q96RQ1 377 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 DNAJC7Q99615 494 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 LZTS3O60299 673 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 APOA4P06727 396 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 GPD1P21695 349 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 PSMA4P25789 261 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 CCDC142Q17RM4 750 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 GJC2Q5T442 439 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 CCDC103Q8IW40 242 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 USP33Q8TEY7 942 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 RBBP8Q99708 897 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 SELENONQ9NZV5 590 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 CYTH3O43739 400 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 STRNO43815 780 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 HIST1H2AGP0C0S8 130 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 HIST1H2ADP20671 130 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 KRR1Q13601 381 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 C12orf60Q5U649 245 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 ZNF786Q8N393 782 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 APPL2Q8NEU8 664 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 INPP5DQ92835 1189 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 HIST1H2AHQ96KK5 128 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 HIST1H2AJQ99878 128 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 H2AFJQ9BTM1 129 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 ISCA1Q9BUE6 129 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 IL1RL2Q9HB29 575 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 JPH1Q9HDC5 661 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 TJP2Q9UDY2 1190 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 ABCA8O94911 1581 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 FAM196BA6NMK8 535 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 KLRC1P26715 233 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 ACCSLQ4AC99 568 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 SCUBE1Q8IWY4 988 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 SNX31Q8N9S9 440 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 ADGRA2Q96PE1 1338 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 NDUFS3O75489 264 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 PDK1Q15118 436 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 IYDQ6PHW0 289 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 FEZF2Q8TBJ5 459 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 SPATA18Q8TC71 538 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 KLHL4Q9C0H6 718 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 PABPC3Q9H361 631 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 H2AFY2Q9P0M6 372 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 WHRNQ9P202 907 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 RALBP11234 206 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 RBP5P82980 135 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 IFNEQ86WN2 208 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 FRMD8Q9BZ67 464 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 GOLPH3Q9H4A6 298 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 HEY2Q9UBP5 337 aa15.17■□□□□ 0.02
CSNK1D-217ENST00000581241 CLASP2O75122 1294 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 FDX1P10109 184 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 AKR1B1P15121 316 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 GRIK1P39086 918 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 RGS7P49802 495 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 ERVK-24P63145 666 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 NLRP9Q7RTR0 991 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 DCDC2Q9UHG0 476 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 ZNF280CQ8ND82 737 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 SHCBP1Q8NEM2 672 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 KCNB2Q92953 911 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 GHRP10912 638 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 PSMC3P17980 439 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms