RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ASS1P00966 412 aaKnown RBP16.63■□□□□ 0.25
SS18-216ENST00000580751 ADH1AP07327 375 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 P4HA1P13674 534 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 PBX1P40424 430 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 NDUFV1P49821 464 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 UBXN1Q04323 297 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 KCNH2Q12809 1159 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 TCEAL5Q5H9L2 206 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 ZNF667Q5HYK9 610 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 SPECC1LQ69YQ0 1117 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 SCARA3Q6AZY7 606 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 OVOS1Q6IE37 1185 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 PRSS55Q6UWB4 352 aaPredicted RBP16.63■□□□□ 0.25
SS18-216ENST00000580751 DPH6Q7L8W6 267 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 VSTM4Q8IW00 320 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 NUP58Q9BVL2 599 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 RAB20Q9NX57 234 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 MTRRQ9UBK8 725 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 DAAM1Q9Y4D1 1078 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 TSC2P49815 1807 aa16.63■□□□□ 0.25
SS18-216ENST00000580751 TEX28O15482 410 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 NCK2O43639 380 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
SS18-216ENST00000580751 NRIP1P48552 1158 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 TRIM14Q14142 442 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 MRPL58Q14197 206 aaKnown RBP16.62■□□□□ 0.25
SS18-216ENST00000580751 DUSP6Q16828 381 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 CTXN3Q4LDR2 81 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 FIGNQ5HY92 759 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 SMYD5Q6GMV2 418 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 ADGRD2Q7Z7M1 963 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 MMS19Q96T76 1030 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 L1RE1Q9UN81 338 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
SS18-216ENST00000580751 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.62■□□□□ 0.25
SS18-216ENST00000580751 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
SS18-216ENST00000580751 OR6C75A6NL08 312 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 FAM163BP0C2L3 166 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 KLRC2P26717 231 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 GSDMDP57764 484 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 NOP14P78316 857 aaKnown RBP16.61■□□□□ 0.25
SS18-216ENST00000580751 WDR44Q5JSH3 913 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 WSCD1Q658N2 575 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 SLC8B1Q6J4K2 584 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 RBM23Q86U06 439 aaKnown RBP16.61■□□□□ 0.25
SS18-216ENST00000580751 ADGRF2Q8IZF7 708 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 THEM5Q8N1Q8 247 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 FAXDC2Q96IV6 333 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 KLHL5Q96PQ7 755 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 EDEM3Q9BZQ6 932 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 NIF3L1Q9GZT8 377 aa16.61■□□□□ 0.25
SS18-216ENST00000580751 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
SS18-216ENST00000580751 CLASP2O75122 1294 aaKnown RBP16.6■□□□□ 0.25
SS18-216ENST00000580751 TACC1O75410 805 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 C1RP00736 705 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 RPL17P18621 184 aaKnown RBP16.6■□□□□ 0.25
SS18-216ENST00000580751 LHX1P48742 406 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 HYAL1Q12794 435 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 SOWAHAQ2M3V2 549 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 LIMS2Q7Z4I7 341 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 DRC7Q8IY82 874 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 EFHBQ8N7U6 833 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 SEMA4DQ92854 862 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 CLSTN3Q9BQT9 956 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 PI4K2AQ9BTU6 479 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 FBXL5Q9UKA1 691 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 CDY1Q9Y6F8 540 aa16.6■□□□□ 0.25
SS18-216ENST00000580751 PES1O00541 588 aaKnown RBP16.59■□□□□ 0.25
SS18-216ENST00000580751 PER2O15055 1255 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 TEX33O43247 280 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 TBC1D4O60343 1298 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 GLUD1P00367 558 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 TPM1P09493 284 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
SS18-216ENST00000580751 ASPAP45381 313 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 RAB33AQ14088 237 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 SPOPLQ6IQ16 392 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 MAFAQ8NHW3 353 aaPredicted RBP16.59■□□□□ 0.25
SS18-216ENST00000580751 DPP7Q9UHL4 492 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 POLIQ9UNA4 740 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 BRWD1Q9NSI6 2320 aa16.59■□□□□ 0.25
SS18-216ENST00000580751 GABRDO14764 452 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 CPB1P15086 417 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 PCSK1P29120 753 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 OR1D2P34982 312 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 DEKP35659 375 aaKnown RBP16.58■□□□□ 0.24
SS18-216ENST00000580751 CLCN4P51793 760 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 TSPY1Q01534 308 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 ROR1Q01973 937 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
SS18-216ENST00000580751 HS1BP3Q53T59 392 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 RSPO2Q6UXX9 243 aaPredicted RBP16.58■□□□□ 0.24
SS18-216ENST00000580751 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
SS18-216ENST00000580751 GBP6Q6ZN66 633 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms