RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 NUP88Q99567 741 aaPredicted RBP7.59□□□□□ -1.19
PPP4R1-216ENST00000580283 SPC25Q9HBM1 224 aa7.59□□□□□ -1.19
PPP4R1-216ENST00000580283 MCM9Q9NXL9 1143 aa7.59□□□□□ -1.19
PPP4R1-216ENST00000580283 TNNQ9UQP3 1299 aa7.59□□□□□ -1.19
PPP4R1-216ENST00000580283 TCRBV5S4A2TA0A5A2 114 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 WNT9AO14904 365 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 ATP2A1O14983 1001 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 PRKAB2O43741 272 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 CABYRO75952 493 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 IQCF3P0C7M6 154 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 DNM2P50570 870 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 ERVK-21P61565 698 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 DEFB103AP81534 67 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 ICA1Q05084 483 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 SLFN5Q08AF3 891 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 CRY1Q16526 586 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 FSCN1Q16658 493 aaKnown RBP7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 VASNQ6EMK4 673 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 ARHGAP36Q6ZRI8 547 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 TRMT2AQ8IZ69 625 aaKnown RBP7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 FAM133AQ8N9E0 248 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 EAF2Q96CJ1 260 aaPredicted RBP7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 CTAGE1Q96RT6 745 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 MRPL4Q9BYD3 311 aaKnown RBP7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 CD244Q9BZW8 370 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 CCDC8Q9H0W5 538 aaPredicted RBP7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 HSPBP1Q9NZL4 362 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 CROTQ9UKG9 612 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 MYH7BA7E2Y1 1941 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 MYH7P12883 1935 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 MYO10Q9HD67 2058 aa7.58□□□□□ -1.2
PPP4R1-216ENST00000580283 TNKSO95271 1327 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 LINC01553A4QN01 128 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 H3BQ06 376 aaPredicted RBP7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 PFKMP08237 780 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 FAHP16930 419 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 KRT15P19012 456 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 COPB2P35606 906 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 EPHA5P54756 1037 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 TLK2Q86UE8 772 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 CERS3Q8IU89 383 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 CPXCR1Q8N123 301 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 GSTCDQ8NEC7 633 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 SLC7A14Q8TBB6 771 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 ADAMTS17Q8TE56 1095 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 TEX13BQ9BXU2 312 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 RAVER2Q9HCJ3 691 aaKnown RBP7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 SMC4Q9NTJ3 1288 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 MTUS1Q9ULD2 1270 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 FAM186AA6NE01 2351 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 COL4A6Q14031 1691 aa7.57□□□□□ -1.2
PPP4R1-216ENST00000580283 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 DDX3XO00571 662 aaKnown RBP eCLIP7.56□□□□□ -1.22e-14■■■■□ 24.5
PPP4R1-216ENST00000580283 GNAI3P08754 354 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 PDE6AP16499 860 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 WDR5P61964 334 aaKnown RBP7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 TRIM61Q5EBN2 209 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 C12orf60Q5U649 245 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 BTBD8Q5XKL5 378 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 FRMD5Q7Z6J6 570 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 ZNF761Q86XN6 746 aaPredicted RBP7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 ANKRD35Q8N283 1001 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 LCORLQ8N3X6 602 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 PRPF38AQ8NAV1 312 aaKnown RBP7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 SEZ6LQ9BYH1 1024 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 L2HGDHQ9H9P8 463 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 SLC38A10Q9HBR0 1119 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 RTEL1Q9NZ71 1219 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 SWAP70Q9UH65 585 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 SRPK3Q9UPE1 567 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 HDAC5Q9UQL6 1122 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 TELO2Q9Y4R8 837 aa7.56□□□□□ -1.2
PPP4R1-216ENST00000580283 RALGAPA2Q2PPJ7 1873 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 ZFHX4Q86UP3 3567 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 KIF28PB7ZC32 967 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 F5H6K3 240 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 RASGRP1O95267 797 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 GJB5O95377 273 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 CHGBP05060 677 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 ACTN1P12814 892 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 RFC2P35250 354 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 PURAQ00577 322 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 KLRC3Q07444 240 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 HERC4Q5GLZ8 1057 aaPredicted RBP7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 FAM26FQ5R3K3 315 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 ERICH6BQ5W0A0 696 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 MCTP2Q6DN12 878 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 IQSEC1Q6DN90 963 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 C16orf86Q6ZW13 317 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 NOL8Q76FK4 1167 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 BRAPQ7Z569 592 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 BMP8AQ7Z5Y6 402 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 OSTM1Q86WC4 334 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 PTRH1Q86Y79 214 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 SSH3Q8TE77 659 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 CCDC17Q96LX7 622 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 RAD9AQ99638 391 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 SLF1Q9BQI6 1058 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms