RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 SEL1L2Q5TEA6 688 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 TRNP1Q6NT89 227 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 TMC3Q7Z5M5 1100 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 USP37Q86T82 979 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 DPP9Q86TI2 863 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 ARFGAP1Q8N6T3 406 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 UBL4BQ8N7F7 174 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 C12orf50Q8NA57 414 aaPredicted RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 TRPV1Q8NER1 839 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 FEZF2Q8TBJ5 459 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 GTF3C2Q8WUA4 911 aaPredicted RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 TMEM40Q8WWA1 233 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 RNF25Q96BH1 459 aaPredicted RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 ANKRD36BP1Q96IX9 119 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 PIWIL1Q96J94 861 aaKnown RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 PWWP2AQ96N64 755 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 ZMAT2Q96NC0 199 aaKnown RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 ZIC5Q96T25 663 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 OSBPL7Q9BZF2 842 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 DCLK3Q9C098 648 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 FAM49AQ9H0Q0 323 aaPredicted RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 TUT1Q9H6E5 874 aaKnown RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 RPF1Q9H9Y2 349 aaKnown RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 MED4Q9NPJ6 270 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 PRMT7Q9NVM4 692 aaPredicted RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.92□□□□□ -1.62
NUP85-213ENST00000579838 ADAM22Q9P0K1 906 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 NXF1Q9UBU9 619 aaKnown RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 TUBGCP4Q9UGJ1 667 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 KCNG1Q9UIX4 513 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 PCDHGC3Q9UN70 934 aa4.92□□□□□ -1.62
NUP85-213ENST00000579838 GNEQ9Y223 722 aaKnown RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 COL4A4P53420 1690 aaPredicted RBP4.92□□□□□ -1.62
NUP85-213ENST00000579838 CCDC66A2RUB6 948 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 FAM187AA6NFU0 413 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 UNCXA6NJT0 531 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 C3orf70A6NLC5 250 aaPredicted RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 DCDC2CA8MYV0 355 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 F8VP50 259 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 GOLGA8SH3BPF8 625 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 HAS3O00219 553 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TULP2O00295 520 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 PIK3R2O00459 728 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TLR3O15455 904 aaKnown RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 ASAP2O43150 1006 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 DYNC1LI2O43237 492 aaPredicted RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 STRNO43815 780 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 HSF2BPO75031 334 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 CILPO75339 1184 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 MICAL2O94851 1124 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 IL18RAPO95256 599 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 MYBL1P10243 752 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 RALAP11233 206 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 KRT10P13645 584 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 CYP2B6P20813 491 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 IVDP26440 423 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 HOXA11P31270 313 aaPredicted RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 CHKAP35790 457 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 GRM5P41594 1212 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 LMAN1P49257 510 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 PSEN2P49810 448 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 AP3M2P53677 418 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 RWDD2BP57060 319 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 BPIFB4P59827 614 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 FKBP1BP68106 108 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 ADAM17P78536 824 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TNFAIP2Q03169 654 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 KRT17Q04695 432 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 POU5F1BQ06416 359 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 ZNF844Q08AG5 666 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TRIM32Q13049 653 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 MAP2K5Q13163 448 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 KLF1Q13351 362 aaPredicted RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 TRPC3Q13507 836 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 CUL1Q13616 776 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 DHX34Q14147 1143 aaKnown RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 MFSD10Q14728 455 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 SURF1Q15526 300 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TAF5Q15542 800 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TRIP13Q15645 432 aaPredicted RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 CCDC142Q17RM4 750 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 DUOXA2Q1HG44 320 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 SGSM1Q2NKQ1 1148 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 CFAP58Q5T655 872 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 ALS2CLQ60I27 953 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 KCTD16Q68DU8 428 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TTC19Q6DKK2 380 aaPredicted RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 RHBDF2Q6PJF5 856 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 CCDC137Q6PK04 289 aaKnown RBP4.91□□□□□ -1.62
NUP85-213ENST00000579838 MFSD7Q6UXD7 560 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 LRRC31Q6UY01 552 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 TRIM72Q6ZMU5 477 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 XYLT1Q86Y38 959 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 CD302Q8IX05 232 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 EMC1Q8N766 993 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 C2orf69Q8N8R5 385 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 GLIS1Q8NBF1 620 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 UBA3Q8TBC4 463 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 FBXO25Q8TCJ0 367 aa4.91□□□□□ -1.62
NUP85-213ENST00000579838 NLRP7Q8WX94 980 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms