RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 SDHAF4Q5VUM1 108 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 WSCD1Q658N2 575 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 ARMCX5Q6P1M9 558 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 TXNDC11Q6PKC3 985 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 CRELD2Q6UXH1 353 aaPredicted RBP9.67□□□□□ -0.86
GGA3-207ENST00000578896 YAF2Q8IY57 180 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 NOC3LQ8WTT2 800 aaKnown RBP9.67□□□□□ -0.86
GGA3-207ENST00000578896 DNASE1L2Q92874 299 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 IRF7Q92985 503 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 SAAL1Q96ER3 474 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 NELL2Q99435 816 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 PYM1Q9BRP8 204 aaKnown RBP9.67□□□□□ -0.86
GGA3-207ENST00000578896 FGFBP2Q9BYJ0 223 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 CCSER1Q9C0I3 900 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
GGA3-207ENST00000578896 TMLHEQ9NVH6 421 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 C2orf42Q9NWW7 574 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 ZSCAN32Q9NX65 697 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 DPP3Q9NY33 737 aa9.67□□□□□ -0.86
GGA3-207ENST00000578896 FBXO2Q9UK22 296 aaPredicted RBP9.67□□□□□ -0.86
GGA3-207ENST00000578896 AGO2Q9UKV8 859 aaKnown RBP9.67□□□□□ -0.86
GGA3-207ENST00000578896 MRPS17Q9Y2R5 130 aaKnown RBP9.67□□□□□ -0.86
GGA3-207ENST00000578896 DENND4CQ5VZ89 1909 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 GON4LQ3T8J9 2241 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 SPAG17Q6Q759 2223 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 A0A087X0B3 334 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 MED19A0JLT2 244 aaPredicted RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 ANO9A1A5B4 782 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 ARNTLO00327 626 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 MAN2B1O00754 1011 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 SLC26A4O43511 780 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 PRAMEF12O95522 483 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 ATF6P18850 670 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 RPS9P46781 194 aaKnown RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 MCM2P49736 904 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 CASP5P51878 434 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 KPNA1P52294 538 aaPredicted RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 SATB1Q01826 763 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 TNK2Q07912 1038 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 DMWDQ09019 674 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 RESTQ13127 1097 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 SRSF5Q13243 272 aaKnown RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 PLD1Q13393 1074 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 MYBPC2Q14324 1141 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 KYAT1Q16773 422 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 CCDC142Q17RM4 750 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 ZNF528Q3MIS6 628 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 RRAGBQ5VZM2 374 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 Q6ZS52 159 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 ZNF720Q7Z2F6 126 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 BRAPQ7Z569 592 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 CD302Q8IX05 232 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 KRI1Q8N9T8 703 aaKnown RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 LEMD2Q8NC56 503 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 ZBTB44Q8NCP5 570 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 CSGALNACT1Q8TDX6 532 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 DEPDC1BQ8WUY9 529 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 POMGNT1Q8WZA1 660 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 KCNN1Q92952 543 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 PSMG2Q969U7 264 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 DNAJC19Q96DA6 116 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 BORCS6Q96GS4 357 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 FAM213AQ9BRX8 229 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 ZCWPW1Q9H0M4 648 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 CHRDQ9H2X0 955 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 PCIF1Q9H4Z3 704 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 MRPL44Q9H9J2 332 aaKnown RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 TRPV4Q9HBA0 871 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 PRMT8Q9NR22 394 aaPredicted RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 GTSE1Q9NYZ3 720 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 NCDNQ9UBB6 729 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 MAFFQ9ULX9 164 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 SMG5Q9UPR3 1016 aaKnown RBP9.66□□□□□ -0.86
GGA3-207ENST00000578896 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
GGA3-207ENST00000578896 DPYSL4O14531 572 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 HCRTO43612 131 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 LILRB5O75023 590 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 PRPF6O94906 941 aaKnown RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 BMP15O95972 392 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 CYP11A1P05108 521 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 CHRNB1P11230 501 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 TDGF1P13385 188 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 IDEP14735 1019 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 MAGEA9P43362 315 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 TAF6P49848 677 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 TFAMQ00059 246 aaKnown RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 CUL4AQ13619 759 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 PON2Q15165 354 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 RSPO4Q2I0M5 234 aaPredicted RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 LMBRD2Q68DH5 695 aaPredicted RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 HEATR6Q6AI08 1181 aaKnown RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 METTL23Q86XA0 190 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 NELL1Q92832 810 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 HPS3Q969F9 1004 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 SLC46A2Q9BY10 475 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 ASB7Q9H672 318 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 ABI2Q9NYB9 513 aaPredicted RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 DERAQ9Y315 318 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms