RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 GAS8O95995 478 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 OAS1P00973 400 aaKnown RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 ATF2P15336 505 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 RRM1P23921 792 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 IVDP26440 423 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 PIK3CAP42336 1068 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 ACOT2P49753 483 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 SLC26A2P50443 739 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 PTK6Q13882 451 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 CDCA2Q69YH5 1023 aaPredicted RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 CCDC62Q6P9F0 684 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 R3HDM2Q9Y2K5 976 aaKnown RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 IQCA1LA6NCM1 817 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 SUN1O94901 812 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 HLA-DRAP01903 254 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 BRAFP15056 766 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 TNNI1P19237 187 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 MXD4Q14582 209 aaPredicted RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 EAPPQ56P03 285 aaPredicted RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 GRK7Q8WTQ7 553 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 N4BP2L2Q92802 583 aaPredicted RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 ZBTB45Q96K62 511 aaPredicted RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 TRAIPQ9BWF2 469 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
GGA3-205ENST00000578348 DCLK3Q9C098 648 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 ANKFY1Q9P2R3 1169 aa12.11□□□□□ -0.47
GGA3-205ENST00000578348 IGKV6-21A0A0C4DH24 114 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 O00370 1275 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 HGSO14964 777 aaPredicted RBP12.1□□□□□ -0.47
GGA3-205ENST00000578348 EDN1P05305 212 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 MARK3P27448 753 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 MAN1A1P33908 653 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 KCNJ2P63252 427 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 MPP2Q14168 576 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 HSDL1Q3SXM5 330 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 ZBTB8OSQ8IWT0 167 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 MCOLN2Q8IZK6 566 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 CYP4X1Q8N118 509 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 SLC10A4Q96EP9 437 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 C2orf40Q9H1Z8 148 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 ECT2Q9H8V3 914 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 NINJ2Q9NZG7 142 aa12.1□□□□□ -0.47
GGA3-205ENST00000578348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
GGA3-205ENST00000578348 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 RALAP11233 206 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 CETPP11597 493 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 ELF1P32519 619 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 GJC1P36383 396 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 WNT7BP56706 349 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 BPIFB4P59827 614 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 NCALDP61601 193 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 GRM1Q13255 1194 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 SYDE1Q6ZW31 735 aaPredicted RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 ZNF677Q86XU0 584 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 SRRM1Q8IYB3 904 aaKnown RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 ATL2Q8NHH9 583 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 MAIP1Q8WWC4 291 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 CNTNAP2Q9UHC6 1331 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 ZBTB42B2RXF5 422 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 VNN1O95497 513 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 TXNP10599 105 aaKnown RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 BRD2P25440 801 aaKnown RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 STX2P32856 288 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 AP3M2P53677 418 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 CCNA1P78396 465 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 LAMTOR4Q0VGL1 99 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 ZBTB41Q5SVQ8 909 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 PRUNE1Q86TP1 453 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 BRSK2Q8IWQ3 736 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 CKAP2Q8WWK9 683 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
GGA3-205ENST00000578348 C9orf72Q96LT7 481 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 SLC45A1Q9Y2W3 748 aa12.09□□□□□ -0.47
GGA3-205ENST00000578348 MCM3APO60318 1980 aa12.08□□□□□ -0.47
GGA3-205ENST00000578348 HBP1O60381 514 aa12.08□□□□□ -0.48
GGA3-205ENST00000578348 MSCO60682 206 aa12.08□□□□□ -0.48
GGA3-205ENST00000578348 TOM1L1O75674 476 aa12.08□□□□□ -0.48
GGA3-205ENST00000578348 PRKCBP05771 671 aa12.08□□□□□ -0.48
GGA3-205ENST00000578348 NQO1P15559 274 aaKnown RBP12.08□□□□□ -0.48
GGA3-205ENST00000578348 SLC1A1P43005 524 aa12.08□□□□□ -0.48
GGA3-205ENST00000578348 NSFP46459 744 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms