RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 POLR3CQ9BUI4 534 aaPredicted RBP6.62□□□□□ -1.35
SNX11-204ENST00000577310 GMIPQ9P107 970 aa6.62□□□□□ -1.35
SNX11-204ENST00000577310 SUCLA2Q9P2R7 463 aaPredicted RBP6.62□□□□□ -1.35
SNX11-204ENST00000577310 GABBR1Q9UBS5 961 aa6.62□□□□□ -1.35
SNX11-204ENST00000577310 PCDHA6Q9UN73 950 aa6.62□□□□□ -1.35
SNX11-204ENST00000577310 HES2Q9Y543 173 aa6.62□□□□□ -1.35
SNX11-204ENST00000577310 PCDHA8Q9Y5H6 950 aa6.62□□□□□ -1.35
SNX11-204ENST00000577310 OBSL1O75147 1896 aa6.62□□□□□ -1.35
SNX11-204ENST00000577310 HIVEP3Q5T1R4 2406 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 CASTOR2A6NHX0 329 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 TMEM189-UBE2V1I3L0A0 370 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 K7EQS6 105 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 TRAPPC3O43617 180 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 HMMRO75330 724 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 RECQL4O94761 1208 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 ITGB2P05107 769 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 AXLP30530 894 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 USP11P51784 963 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 ERVPABLB-1P60509 514 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 CYP4A11Q02928 519 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 PDGFRLQ15198 375 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 PCBP1Q15365 356 aaKnown RBP eCLIP6.61□□□□□ -1.35
SNX11-204ENST00000577310 LINC00303Q3SY05 128 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 ARHGAP15Q53QZ3 475 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 IFIT1BQ5T764 474 aaKnown RBP6.61□□□□□ -1.35
SNX11-204ENST00000577310 GPR158Q5T848 1215 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 HES3Q5TGS1 186 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 ZKSCAN2Q63HK3 967 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 NAIF1Q69YI7 327 aaPredicted RBP6.61□□□□□ -1.35
SNX11-204ENST00000577310 TRIM68Q6AZZ1 485 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 NOTUMQ6P988 496 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 FBXL19Q6PCT2 694 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 NIPA1Q7RTP0 329 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 TBC1D10CQ8IV04 446 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 KSR1Q8IVT5 923 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 PGBD3Q8N328 593 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 CCDC33Q8N5R6 958 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 HMGB4Q8WW32 186 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 DNASE2BQ8WZ79 361 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 FOXJ1Q92949 421 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 NLRP4Q96MN2 994 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 EIF2AQ9BY44 585 aaKnown RBP6.61□□□□□ -1.35
SNX11-204ENST00000577310 TBC1D22BQ9NU19 505 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 ZSWIM5Q9P217 1185 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 CACNG4Q9UBN1 327 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 AFF4Q9UHB7 1163 aaKnown RBP6.61□□□□□ -1.35
SNX11-204ENST00000577310 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 NFE2L3Q9Y4A8 694 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 CCDC168Q8NDH2 2452 aa6.61□□□□□ -1.35
SNX11-204ENST00000577310 MYH10P35580 1976 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 NEDD4P46934 1319 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 PCDHGA12O60330 932 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 ZNF217O75362 1048 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 RFPL3O75679 317 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 DXOO77932 396 aaKnown RBP6.6□□□□□ -1.35
SNX11-204ENST00000577310 PRKCBP05771 671 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 AKAP5P24588 427 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 TKTP29401 623 aaKnown RBP6.6□□□□□ -1.35
SNX11-204ENST00000577310 NCBP1Q09161 790 aaKnown RBP6.6□□□□□ -1.35
SNX11-204ENST00000577310 PLD1Q13393 1074 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 ESPL1Q14674 2120 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 SART3Q15020 963 aaKnown RBP6.6□□□□□ -1.35
SNX11-204ENST00000577310 INAVAQ3KP66 663 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 EOGTQ5NDL2 527 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 CCDC81Q6ZN84 652 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 GAREM2Q75VX8 874 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 ZC3H18Q86VM9 953 aaKnown RBP6.6□□□□□ -1.35
SNX11-204ENST00000577310 SRRM1Q8IYB3 904 aaKnown RBP6.6□□□□□ -1.35
SNX11-204ENST00000577310 CPA6Q8N4T0 437 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 MOCOSQ96EN8 888 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 ARHGAP9Q9BRR9 750 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 TRIM6Q9C030 488 aaPredicted RBP6.6□□□□□ -1.35
SNX11-204ENST00000577310 ATXN3LQ9H3M9 355 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 TASP1Q9H6P5 420 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 MINDY3Q9H8M7 445 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 ECT2Q9H8V3 914 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 TMPRSS4Q9NRS4 437 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
SNX11-204ENST00000577310 IGHV1OR15-9A0A0B4J2B8 117 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 SGK1O00141 431 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 TRIM66O15016 1216 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 PPFIA2O75334 1257 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 B3GAT3O94766 335 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 ERLIN2O94905 339 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 THP07101 528 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 ARSAP15289 507 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 SEC13P55735 322 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 ARPP19P56211 112 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 CLDN6P56747 220 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 PRKCEQ02156 737 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
SNX11-204ENST00000577310 IGFBP7Q16270 282 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 ARL13BQ3SXY8 428 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 TSHZ3Q63HK5 1081 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 CC2D1AQ6P1N0 951 aaPredicted RBP6.59□□□□□ -1.35
SNX11-204ENST00000577310 ITPRIPQ8IWB1 547 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 TEX2Q8IWB9 1127 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 TXNDC5Q8NBS9 432 aaKnown RBP6.59□□□□□ -1.35
SNX11-204ENST00000577310 CEP89Q96ST8 783 aa6.59□□□□□ -1.35
SNX11-204ENST00000577310 JPH2Q9BR39 696 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms