RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ABLIM1O14639 778 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 HIP1RO75146 1068 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 VNN2O95498 520 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 CAVIN2O95810 425 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 ODC1P11926 461 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 HOXB3P14651 431 aaPredicted RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 SCP2P22307 547 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 DDX6P26196 483 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMG6-218ENST00000575454 AVPR1AP37288 418 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 TRAPPC10P48553 1259 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 PXNP49023 591 aaPredicted RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 ANAPC15P60006 121 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 CACNB1Q02641 598 aaPredicted RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 MCL1Q07820 350 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 TNK2Q07912 1038 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 RUNX3Q13761 415 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 PDGFRLQ15198 375 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 ZNF174Q15697 407 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 STXBP5Q5T5C0 1151 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 KRT79Q5XKE5 535 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 CC2D1AQ6P1N0 951 aaPredicted RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 ATAD1Q8NBU5 361 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 NSUN7Q8NE18 718 aaKnown RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 C2orf15Q8WU43 125 aaKnown RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 ACDQ96AP0 544 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 FAM83CQ9BQN1 747 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 MKNK1Q9BUB5 465 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 EDEM2Q9BV94 578 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 GKN1Q9NS71 199 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 DDX19AQ9NUU7 478 aaKnown RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 ANKFY1Q9P2R3 1169 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 TUBGCP4Q9UGJ1 667 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 EBF1Q9UH73 591 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 DSEQ9UL01 958 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 ZMIZ1Q9ULJ6 1067 aa9.78□□□□□ -0.84
SMG6-218ENST00000575454 TIMM13Q9Y5L4 95 aaPredicted RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 HELZ2Q9BYK8 2649 aaKnown RBP9.78□□□□□ -0.84
SMG6-218ENST00000575454 BCLAF3A2AJT9 711 aaKnown RBP9.77□□□□□ -0.85
SMG6-218ENST00000575454 MTMR11A4FU01 709 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 C4orf47A7E2U8 309 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 PRAMEF12O95522 483 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 APBB3O95704 486 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 OR4Q2P0C623 313 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 CEACAM1P13688 526 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 CSRP1P21291 193 aaKnown RBP9.77□□□□□ -0.85
SMG6-218ENST00000575454 MATR3P43243 847 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMG6-218ENST00000575454 CREB5Q02930 508 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 PPP2R3AQ06190 1150 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 BFSP1Q12934 665 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 ACAP1Q15027 740 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 ZBTB6Q15916 424 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 ECM1Q16610 540 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 FSTL4Q6MZW2 842 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 SYT13Q7L8C5 426 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 TAS1R3Q7RTX0 852 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 CD302Q8IX05 232 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 CMTM8Q8IZV2 173 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 NECAB1Q8N987 351 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 SNX29Q8TEQ0 813 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 SEPT5Q99719 369 aaPredicted RBP9.77□□□□□ -0.85
SMG6-218ENST00000575454 DUSP15Q9H1R2 295 aaPredicted RBP9.77□□□□□ -0.85
SMG6-218ENST00000575454 FOXP1Q9H334 677 aaPredicted RBP9.77□□□□□ -0.85
SMG6-218ENST00000575454 CRISPLD1Q9H336 500 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 KIF9Q9HAQ2 790 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 NOL7Q9UMY1 257 aaKnown RBP9.77□□□□□ -0.85
SMG6-218ENST00000575454 DMXL2Q8TDJ6 3036 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 LOC400499M0QZD8 3231 aa9.77□□□□□ -0.85
SMG6-218ENST00000575454 LAMA1P25391 3075 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 TTC26A0AVF1 554 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 C1QTNF9BB2RNN3 333 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 KHNYNO15037 678 aaKnown RBP9.76□□□□□ -0.85
SMG6-218ENST00000575454 SLC16A4O15374 487 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 MEFVO15553 781 aaPredicted RBP9.76□□□□□ -0.85
SMG6-218ENST00000575454 RNF40O75150 1001 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 LARGE1O95461 756 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 C1QTNF9P0C862 333 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 CXCL8P10145 99 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 PLS3P13797 630 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 GUCY2CP25092 1073 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 LILRA4P59901 499 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 ZNF252P-AS1Q0IIN9 211 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 FOXC1Q12948 553 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 GNL2Q13823 731 aaKnown RBP9.76□□□□□ -0.85
SMG6-218ENST00000575454 ME3Q16798 604 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 MGAT5BQ3V5L5 792 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 USP39Q53GS9 565 aaKnown RBP9.76□□□□□ -0.85
SMG6-218ENST00000575454 TTC38Q5R3I4 469 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 SH3PXD2AQ5TCZ1 1133 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 RINT1Q6NUQ1 792 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 C1orf186Q6ZWK4 172 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 METTL23Q86XA0 190 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 DAW1Q8N136 415 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 THEM5Q8N1Q8 247 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 TMEM161BQ8NDZ6 487 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 ZBTB45Q96K62 511 aaPredicted RBP9.76□□□□□ -0.85
SMG6-218ENST00000575454 P2RY13Q9BPV8 354 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 SLC46A2Q9BY10 475 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms