RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TMEM35BQ8NCS4 154 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 NLRP7Q8WX94 980 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 ACSF2Q96CM8 615 aaPredicted RBP25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 MAML3Q96JK9 1138 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 MORF4L1Q9UBU8 362 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 PASKQ96RG2 1323 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 DCDC2CA8MYV0 355 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 F8VP50 259 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 PSTPIP1O43586 416 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 IL18RAPO95256 599 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 PMS2P54278 862 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 GUCY1A3Q02108 690 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 FAM187BQ17R55 369 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 SLC10A6Q3KNW5 377 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 MARCH8Q5T0T0 291 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 TXNRD3NBQ6F5E7 133 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 KDM7AQ6ZMT4 941 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 CXorf38Q8TB03 319 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 DCLK3Q9C098 648 aa25.09■■□□□ 1.61
NPLOC4-217ENST00000574897 HMGB1P1B2RPK0 211 aaPredicted RBP25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 TP73O15350 636 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 MAGEB2O15479 319 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 LACTBP83111 547 aaPredicted RBP25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 KLF1Q13351 362 aaPredicted RBP25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 ZNF667Q5HYK9 610 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 DNAJC24Q6P3W2 148 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 UHMK1Q8TAS1 419 aaKnown RBP25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 NPLOC4Q8TAT6 608 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 SCLT1Q96NL6 688 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 SEMA4AQ9H3S1 761 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 CALCOCO1Q9P1Z2 691 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 SCN1AP35498 2009 aa25.08■■□□□ 1.61
NPLOC4-217ENST00000574897 TMEM62Q0P6H9 643 aa25.08■■□□□ 1.6
NPLOC4-217ENST00000574897 EMID1Q96A84 441 aaPredicted RBP25.08■■□□□ 1.6
NPLOC4-217ENST00000574897 CXCL16Q9H2A7 254 aa25.08■■□□□ 1.6
NPLOC4-217ENST00000574897 TRIP12Q14669 1992 aaPredicted RBP25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 STRNO43815 780 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 ERLIN2O94905 339 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 LSM8O95777 96 aaKnown RBP25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 CALB1P05937 261 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 MCF2P10911 925 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 RAD23BP54727 409 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 GRIK4Q16099 956 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 KRT71Q3SY84 523 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 PTPN20Q4JDL3 420 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 ERICH1Q86X53 443 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 KATNAL2Q8IYT4 538 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 KIAA0319LQ8IZA0 1049 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 ART4Q93070 314 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 BCO2Q9BYV7 579 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 OSBPL8Q9BZF1 889 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 IP6K2Q9UHH9 426 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 PPFIA4O75335 1185 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 MMP3P08254 477 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 KRT10P13645 584 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 IRX5P78411 483 aaPredicted RBP25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 ANKRD23Q86SG2 305 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 IFNLR1Q8IU57 520 aaPredicted RBP25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 PCDHGC3Q9UN70 934 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 GINS2Q9Y248 185 aa25.07■■□□□ 1.6
NPLOC4-217ENST00000574897 GOLGA8SH3BPF8 625 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 EIF3HO15372 352 aaKnown RBP eCLIP25.06■■□□□ 1.62e-7■□□□□ 11
NPLOC4-217ENST00000574897 TSPAN1O60635 241 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 GCLCP48506 637 aaPredicted RBP25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 VPS41P49754 854 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 POU5F1BQ06416 359 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 GRB14Q14449 540 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 DCUN1D2Q6PH85 259 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 PRUNE1Q86TP1 453 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 CCDC114Q96M63 670 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 PABPC3Q9H361 631 aaKnown RBP25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 ASIC3Q9UHC3 531 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 SLC45A1Q9Y2W3 748 aa25.06■■□□□ 1.6
NPLOC4-217ENST00000574897 POLR2BP30876 1174 aaKnown RBP25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 CDH5P33151 784 aaPredicted RBP25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 IFFO1Q0D2I5 559 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 PPP1R15BQ5SWA1 713 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 PRAMEF19Q5SWL8 479 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 ZFYVE27Q5T4F4 411 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 KAZNQ674X7 775 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 ILDR2Q71H61 639 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 CCDC25Q86WR0 208 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 OR6J1Q8NGC5 347 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 SETD4Q9NVD3 440 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 NOVA2Q9UNW9 492 aaKnown RBP25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 ZEB2O60315 1214 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 SLC29A2Q14542 456 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 ZNF467Q7Z7K2 595 aaPredicted RBP25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 SLCO2A1Q92959 643 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 RUNDC3BQ96NL0 473 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 ELOVL4Q9GZR5 314 aa25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 GBA2Q9HCG7 927 aaPredicted RBP25.05■■□□□ 1.6
NPLOC4-217ENST00000574897 COL1A2P08123 1366 aa25.04■■□□□ 1.6
NPLOC4-217ENST00000574897 EIF4BP23588 611 aaKnown RBP25.04■■□□□ 1.6
NPLOC4-217ENST00000574897 ACVR2BQ13705 512 aa25.04■■□□□ 1.6
NPLOC4-217ENST00000574897 KIZQ2M2Z5 673 aa25.04■■□□□ 1.6
NPLOC4-217ENST00000574897 DUSP28Q4G0W2 176 aa25.04■■□□□ 1.6
NPLOC4-217ENST00000574897 SLC4A11Q8NBS3 891 aa25.04■■□□□ 1.6
NPLOC4-217ENST00000574897 TINF2Q9BSI4 451 aa25.04■■□□□ 1.6
NPLOC4-217ENST00000574897 MTRF1LQ9UGC7 380 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms