RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 M0QZ92 97 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 ATP8B1O43520 1251 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 KCNE1P15382 129 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 CTNNA2P26232 953 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 GJA8P48165 433 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 GUCY2FP51841 1108 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 MYO1EQ12965 1108 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 CLUL1Q15846 466 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 KCNA10Q16322 511 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 PASD1Q8IV76 773 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 TMEM130Q8N3G9 435 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 LRRC52Q8N7C0 313 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 UBL4BQ8N7F7 174 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 BEST2Q8NFU1 509 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 CRISPLD2Q9H0B8 497 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 ARFGAP3Q9NP61 516 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 HES2Q9Y543 173 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 CDY2AQ9Y6F7 541 aa30.24■■■□□ 2.43
CTDNEP1-210ENST00000574322 MED7O43513 233 aa30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 ERLIN1O75477 346 aa30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 CDH8P55286 799 aa30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 ZNF394Q53GI3 561 aa30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 DCAF12L1Q5VU92 463 aa30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 PCSK9Q8NBP7 692 aaKnown RBP30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 CXCL16Q9H2A7 254 aa30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 MRPL47Q9HD33 250 aaKnown RBP30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 UBQLN1Q9UMX0 589 aaKnown RBP30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 NOC2LQ9Y3T9 749 aaKnown RBP30.23■■■□□ 2.43
CTDNEP1-210ENST00000574322 RAP1GAPP47736 663 aa30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 PEX5P50542 639 aa30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 SLC4A11Q8NBS3 891 aa30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 C11orf70Q9BRQ4 267 aa30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 LRRC1Q9BTT6 524 aa30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 SCINQ9Y6U3 715 aa30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 ALG3Q92685 438 aa30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 SENP6Q9GZR1 1112 aaPredicted RBP30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 BARX2Q9UMQ3 279 aaPredicted RBP30.22■■■□□ 2.43
CTDNEP1-210ENST00000574322 CCDC66A2RUB6 948 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 RRP9O43818 475 aaKnown RBP30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 CALB1P05937 261 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 CTNNA1P35221 906 aaKnown RBP30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 SLC1A1P43005 524 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 TNNC1P63316 161 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 MAMLD1Q13495 774 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 MMS22LQ6ZRQ5 1243 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 WDTC1Q8N5D0 677 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 SMG8Q8ND04 991 aaKnown RBP30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 TMEM176AQ96HP8 235 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 ABHD8Q96I13 439 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 ELOVL4Q9GZR5 314 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 ANAPC7Q9UJX3 599 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 PCDHA3Q9Y5H8 950 aa30.21■■■□□ 2.43
CTDNEP1-210ENST00000574322 KBTBD13C9JR72 458 aa30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 CCDC188H7C350 402 aa30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 PTPN11Q06124 597 aaPredicted RBP30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 MGAT3Q09327 533 aa30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 CHST12Q9NRB3 414 aa30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 KIAA1257Q9ULG3 409 aa30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 IPPQ9Y573 584 aa30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 CEP83Q9Y592 693 aa30.2■■■□□ 2.43
CTDNEP1-210ENST00000574322 GRIN2DO15399 1336 aa30.2■■■□□ 2.42
CTDNEP1-210ENST00000574322 SMIM28A0A1B0GU29 152 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 XPOTO43592 962 aaKnown RBP30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 CABYRO75952 493 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 CD4P01730 458 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 TNS4Q8IZW8 715 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 WNT8BQ93098 351 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 BTBD6Q96KE9 485 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 TWNKQ96RR1 684 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 NAP1L3Q99457 506 aaPredicted RBP30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 PARVAQ9NVD7 372 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 TCRBV5S1A1TA0A578 114 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 TMEM110-MUSTN1A8MSY1 372 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 DNM1LO00429 736 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 CHRNA1P02708 482 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 CYP3A5P20815 502 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 BEND6Q5SZJ8 279 aaPredicted RBP30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 KRT35Q92764 455 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 RNPC3Q96LT9 517 aaKnown RBP30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 TSEN34Q9BSV6 310 aaKnown RBP30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 TUBGCP4Q9UGJ1 667 aa30.19■■■□□ 2.42
CTDNEP1-210ENST00000574322 FRMPD3Q5JV73 1810 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 MYO1FO00160 1098 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 AKAP5P24588 427 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 SSTR3P32745 418 aaPredicted RBP30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 FAM47CQ5HY64 1035 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 C9orf57Q5W0N0 161 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 C8orf74Q6P047 294 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 C1orf131Q8NDD1 294 aaKnown RBP30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 RNF39Q9H2S5 420 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 RNF216Q9NWF9 866 aaPredicted RBP30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 LCMT1Q9UIC8 334 aa30.18■■■□□ 2.42
CTDNEP1-210ENST00000574322 MOXD2PA6NHM9 499 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 PIRO00625 290 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 TLR3O15455 904 aaKnown RBP30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 SPOPO43791 374 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 RPS6KA5O75582 802 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 VDRP11473 427 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 CD19P15391 556 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 RNASE9P60153 205 aaKnown RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms