RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 GZF1Q9H116 711 aaPredicted RBP11.85□□□□□ -0.51
CHD3-216ENST00000573936 TMEM8AQ9HCN3 771 aa11.85□□□□□ -0.51
CHD3-216ENST00000573936 FBXL5Q9UKA1 691 aa11.85□□□□□ -0.51
CHD3-216ENST00000573936 MAFFQ9ULX9 164 aa11.85□□□□□ -0.51
CHD3-216ENST00000573936 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
CHD3-216ENST00000573936 CDY1Q9Y6F8 540 aa11.85□□□□□ -0.51
CHD3-216ENST00000573936 ANK1P16157 1881 aa11.85□□□□□ -0.51
CHD3-216ENST00000573936 ZDBF2Q9HCK1 2354 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 TGM5O43548 720 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 GLP2RO95838 553 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 CCDC192P0DO97 292 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 P4HA1P13674 534 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 EPCAMP16422 314 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 RPL17P18621 184 aaKnown RBP11.84□□□□□ -0.51
CHD3-216ENST00000573936 OR1D2P34982 312 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 LHX1P48742 406 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 TNNC1P63316 161 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 NCOA4Q13772 614 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 SGSM1Q2NKQ1 1148 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
CHD3-216ENST00000573936 TCERG1LQ5VWI1 586 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 TPGS2Q68CL5 300 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 KRT39Q6A163 491 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 LILRA6Q6PI73 481 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 CYP26C1Q6V0L0 522 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 CCDC150Q8NCX0 1101 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 ZNF461Q8TAF7 563 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 TAF4BQ92750 862 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 EEF2KMTQ96G04 330 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 MSLNLQ96KJ4 702 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 IMPG2Q9BZV3 1241 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 VRTNQ9H8Y1 702 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 ANO10Q9NW15 660 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 CLEC1BQ9P126 229 aa11.84□□□□□ -0.51
CHD3-216ENST00000573936 BARX2Q9UMQ3 279 aaPredicted RBP11.84□□□□□ -0.51
CHD3-216ENST00000573936 TIMM13Q9Y5L4 95 aaPredicted RBP11.84□□□□□ -0.51
CHD3-216ENST00000573936 USP34Q70CQ2 3546 aa11.83□□□□□ -0.51
CHD3-216ENST00000573936 N4BP1O75113 896 aaKnown RBP11.83□□□□□ -0.52
CHD3-216ENST00000573936 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 ELF1P32519 619 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 PIK3CAP42336 1068 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 GCLMP48507 274 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 MYL6P60660 151 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 MYL7Q01449 175 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 ITIH3Q06033 890 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 SMARCB1Q12824 385 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 UVSSAQ2YD98 709 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 DPCR1Q3MIW9 517 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 WDR72Q3MJ13 1102 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 DCAF17Q5H9S7 520 aaPredicted RBP11.83□□□□□ -0.52
CHD3-216ENST00000573936 C1orf220Q5T0J3 134 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 LIN9Q5TKA1 542 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 WSCD1Q658N2 575 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 CES5AQ6NT32 575 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 CAVIN1Q6NZI2 390 aaKnown RBP11.83□□□□□ -0.52
CHD3-216ENST00000573936 C15orf39Q6ZRI6 1047 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 DCP1BQ8IZD4 617 aaKnown RBP11.83□□□□□ -0.52
CHD3-216ENST00000573936 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 SMRP1Q8NCR6 262 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 KREMEN2Q8NCW0 462 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 VN1R2Q8NFZ6 395 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 SFXN1Q9H9B4 322 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 MAN1C1Q9NR34 630 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 ZDHHC7Q9NXF8 308 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 TECTAO75443 2155 aa11.83□□□□□ -0.52
CHD3-216ENST00000573936 TMEM221A6NGB7 291 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 M0R296 226 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ADAM12O43184 909 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 TACC1O75410 805 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ABLIM3O94929 683 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 CLSTN1O94985 981 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 VNN1O95497 513 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 HLA-DRAP01903 254 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 CPB1P15086 417 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ATF2P15336 505 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 PCSK1P29120 753 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 MXI1P50539 228 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
CHD3-216ENST00000573936 ARPP19P56211 112 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 TSPY1Q01534 308 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ROR1Q01973 937 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 PPP3CAQ08209 521 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 CETN1Q12798 172 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 STX1AQ16623 288 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 SOWAHAQ2M3V2 549 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ZNF699Q32M78 642 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ZNF667Q5HYK9 610 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 SYCE2Q6PIF2 218 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 RSPO2Q6UXX9 243 aaPredicted RBP11.82□□□□□ -0.52
CHD3-216ENST00000573936 TRIM67Q6ZTA4 783 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 FAM114A1Q8IWE2 563 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ADGRF2Q8IZF7 708 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 CMASQ8NFW8 434 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms