RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SPTBN2O15020 2390 aa14.4□□□□□ -0.1
CCDC40-205ENST00000571028 CACNA1GO43497 2377 aa14.4□□□□□ -0.1
CCDC40-205ENST00000571028 FANCMQ8IYD8 2048 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 F8W810 466 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 PTGESO14684 152 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CCL16O15467 120 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 EXTL3O43909 919 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 EXOC3O60645 756 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 TADA2AO75478 443 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 LDHAP00338 332 aaKnown RBP14.39□□□□□ -0.11
CCDC40-205ENST00000571028 THP07101 528 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 C8AP07357 584 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CD44P16070 742 aaKnown RBP14.39□□□□□ -0.11
CCDC40-205ENST00000571028 BMP6P22004 513 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 TGM1P22735 817 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 STX17P56962 302 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 NTHL1P78549 312 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 PPP2R3AQ06190 1150 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 DSC1Q08554 894 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 ENOX2Q16206 610 aaKnown RBP14.39□□□□□ -0.11
CCDC40-205ENST00000571028 KYAT1Q16773 422 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CCDC183Q5T5S1 534 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CEP135Q66GS9 1140 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 LILRA6Q6PI73 481 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CBWD2Q8IUF1 395 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 GSTCDQ8NEC7 633 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 DDX1Q92499 740 aaKnown RBP14.39□□□□□ -0.11
CCDC40-205ENST00000571028 NELL1Q92832 810 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CLDN23Q96B33 292 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 EEF2KMTQ96G04 330 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
CCDC40-205ENST00000571028 ADAM28Q9UKQ2 775 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 ANGPTL2Q9UKU9 493 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 CTNND2Q9UQB3 1225 aa14.39□□□□□ -0.11
CCDC40-205ENST00000571028 SF3B1O75533 1304 aaKnown RBP eCLIP14.39□□□□□ -0.11
CCDC40-205ENST00000571028 TRIM49BA6NDI0 452 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 CASTOR2A6NHX0 329 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 PDXKO00764 312 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-205ENST00000571028 FAM189A1O60320 539 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 LRP3O75074 770 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 NR3C1P04150 777 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 RETP07949 1114 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 ADCY1Q08828 1119 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 GRIK3Q13003 919 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 MTAPQ13126 283 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 IL31Q6EBC2 164 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 CRELD2Q6UXH1 353 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-205ENST00000571028 TMEM130Q8N3G9 435 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 CELF5Q8N6W0 485 aaKnown RBP14.38□□□□□ -0.11
CCDC40-205ENST00000571028 XXYLT1Q8NBI6 393 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 ZMAT2Q96NC0 199 aaKnown RBP14.38□□□□□ -0.11
CCDC40-205ENST00000571028 TSG101Q99816 390 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 GTPBP4Q9BZE4 634 aaKnown RBP14.38□□□□□ -0.11
CCDC40-205ENST00000571028 GPR62Q9BZJ7 368 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 GOLGA2P5Q9HBQ8 144 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 RBAKQ9NYW8 714 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-205ENST00000571028 TMEM63CQ9P1W3 806 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 FBXW11Q9UKB1 542 aa14.38□□□□□ -0.11
CCDC40-205ENST00000571028 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
CCDC40-205ENST00000571028 ZNF233A6NK53 670 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 PSMA7O14818 248 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 EFEMP2O95967 443 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 PTMSP20962 102 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 PMS1P54277 932 aaKnown RBP14.37□□□□□ -0.11
CCDC40-205ENST00000571028 WNT7BP56706 349 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 PABPC1LQ4VXU2 614 aaKnown RBP14.37□□□□□ -0.11
CCDC40-205ENST00000571028 LMBRD2Q68DH5 695 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-205ENST00000571028 ANKRD40Q6AI12 368 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 PRSS55Q6UWB4 352 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-205ENST00000571028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-205ENST00000571028 CEP57Q86XR8 500 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 TRIML1Q8N9V2 468 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 ITFG1Q8TB96 612 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 GOLGA5Q8TBA6 731 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 NELFBQ8WX92 580 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-205ENST00000571028 C18orf25Q96B23 403 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-205ENST00000571028 FAM84AQ96KN4 292 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 PDE11AQ9HCR9 933 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 HEBP1Q9NRV9 189 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 CFAP47Q6ZTR5 3102 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 MIA3Q5JRA6 1907 aa14.37□□□□□ -0.11
CCDC40-205ENST00000571028 MAP1BP46821 2468 aaKnown RBP14.36□□□□□ -0.11
CCDC40-205ENST00000571028 CACNA1IQ9P0X4 2223 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 TTC26A0AVF1 554 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 PPP1R3GB7ZBB8 358 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 KIAA0391O15091 583 aaKnown RBP14.36□□□□□ -0.11
CCDC40-205ENST00000571028 FOXD2O60548 495 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-205ENST00000571028 ADRB2P07550 413 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 NFICP08651 508 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 NR2F2P24468 414 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 HOXA9P31269 272 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 CASP4P49662 377 aa14.36□□□□□ -0.11
CCDC40-205ENST00000571028 SNRPFP62306 86 aaKnown RBP14.36□□□□□ -0.11
CCDC40-205ENST00000571028 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms