RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 SPATA20Q8TB22 786 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 EDAQ92838 391 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 GSDMAQ96QA5 445 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 RTP3Q9BQQ7 232 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
TVP23B-204ENST00000571018 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 DNMT3BQ9UBC3 853 aaKnown RBP13.64□□□□□ -0.23
TVP23B-204ENST00000571018 MAPK8IP1Q9UQF2 711 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 BOLA1Q9Y3E2 137 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
TVP23B-204ENST00000571018 INSL5Q9Y5Q6 135 aa13.64□□□□□ -0.23
TVP23B-204ENST00000571018 NCOR1O75376 2440 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 SCN1AP35498 2009 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
TVP23B-204ENST00000571018 VNN2O95498 520 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 FSHRP23945 695 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 GBP2P32456 591 aaPredicted RBP13.63□□□□□ -0.23
TVP23B-204ENST00000571018 CLDN10P78369 228 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 NTHL1P78549 312 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 ZXDAP98168 799 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 BFSP1Q12934 665 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 NFIL3Q16649 462 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 TMEM31Q5JXX7 168 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 PARD3BQ8TEW8 1205 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 ZNF516Q92618 1163 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 PGLYRP2Q96PD5 576 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 MYADMQ96S97 322 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 TMEM209Q96SK2 561 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 ZCWPW1Q9H0M4 648 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 HCFC1R1Q9NWW0 138 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 EPS15L1Q9UBC2 864 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 HOOK1Q9UJC3 728 aaKnown RBP13.63□□□□□ -0.23
TVP23B-204ENST00000571018 SORCS3Q9UPU3 1222 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 PCDHA5Q9Y5H7 936 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 SNX9Q9Y5X1 595 aa13.63□□□□□ -0.23
TVP23B-204ENST00000571018 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 HUS1O60921 280 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-204ENST00000571018 SMC2O95347 1197 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-204ENST00000571018 ASGR2P07307 311 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 LAMP2P13473 410 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 PTPN2P17706 415 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 CASP4P49662 377 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 AP3M2P53677 418 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 DUSP4Q13115 394 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 PABPC1LQ4VXU2 614 aaKnown RBP13.62□□□□□ -0.23
TVP23B-204ENST00000571018 ZNF658Q5TYW1 1059 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-204ENST00000571018 CENPPQ6IPU0 288 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 GET4Q7L5D6 327 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-204ENST00000571018 TMEM86AQ8N2M4 240 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 PDCL2Q8N4E4 241 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 TOP6BLQ8N6T0 577 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 ATAD1Q8NBU5 361 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 SPATA18Q8TC71 538 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 LRFN3Q9BTN0 628 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 CRISPLD1Q9H336 500 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-204ENST00000571018 IGSF9Q9P2J2 1179 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 HSFX1Q9UBD0 423 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 L1RE1Q9UN81 338 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-204ENST00000571018 MUC3AQ02505 3323 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 TSC2P49815 1807 aa13.62□□□□□ -0.23
TVP23B-204ENST00000571018 FAM86C2PA6NEL3 165 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 GABRDO14764 452 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 MAPK13O15264 365 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
TVP23B-204ENST00000571018 RHOP08100 348 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 NR2F2P24468 414 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 TWF1Q12792 350 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 MTMR3Q13615 1198 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 SOWAHAQ2M3V2 549 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 ZCWPW2Q504Y3 356 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 CEP135Q66GS9 1140 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 LIMS2Q7Z4I7 341 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 UBALD2Q8IYN6 164 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 SMYD4Q8IYR2 804 aaPredicted RBP13.61□□□□□ -0.23
TVP23B-204ENST00000571018 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 FGF13Q92913 245 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 SMARCE1Q969G3 411 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 ACBD6Q9BR61 282 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 GTPBP4Q9BZE4 634 aaKnown RBP13.61□□□□□ -0.23
TVP23B-204ENST00000571018 KCNK12Q9HB15 430 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 CEP72Q9P209 647 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 CDH7Q9ULB5 785 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 FRMD4BQ9Y2L6 1034 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 YIPF1Q9Y548 306 aa13.61□□□□□ -0.23
TVP23B-204ENST00000571018 LRRIQ3A6PVS8 624 aaPredicted RBP13.6□□□□□ -0.23
TVP23B-204ENST00000571018 STAU1O95793 577 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms