RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CGRRF1Q99675 332 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 SEPT5Q99719 369 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 LPIN3Q9BQK8 851 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 CORO1BQ9BR76 489 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 PRKD2Q9BZL6 878 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 CRISPLD1Q9H336 500 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 KIAA1586Q9HCI6 787 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 DDX43Q9NXZ2 648 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 PRKAG3Q9UGI9 489 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 DPP7Q9UHL4 492 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 HOOK1Q9UJC3 728 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 L1RE1Q9UN81 338 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 FRMD4BQ9Y2L6 1034 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TSC2P49815 1807 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 PDXKO00764 312 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 TBC1D4O60343 1298 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 N4BP1O75113 896 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 AKAP3O75969 853 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 KIF20AO95235 890 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 MYL4P12829 197 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 FSHRP23945 695 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 AARSP49588 968 aaKnown RBP eCLIP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 PMS1P54277 932 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 MYL6P60660 151 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 UBE2HP62256 183 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 MYO1EQ12965 1108 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 MGAT5BQ3V5L5 792 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 ZNF658Q5TYW1 1059 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 SDHAF4Q5VUM1 108 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 SLC8B1Q6J4K2 584 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 LRRTM3Q86VH5 581 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 NT5DC4Q86YG4 428 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 PDCL2Q8N4E4 241 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 GOLGA5Q8TBA6 731 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 GIPC2Q8TF65 315 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 MFSD14AQ96MC6 490 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 TIGD1Q96MW7 591 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 NECTIN4Q96NY8 510 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 MYADMQ96S97 322 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 TSPAN18Q96SJ8 248 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 RTP3Q9BQQ7 232 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 MRPL45Q9BRJ2 306 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 PI4K2AQ9BTU6 479 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 C1QTNF1Q9BXJ1 281 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 RHOBTB2Q9BYZ6 727 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 RMND1Q9NWS8 449 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 ABI2Q9NYB9 513 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 DNMT3BQ9UBC3 853 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 ITGA11Q9UKX5 1188 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 CTNND2Q9UQB3 1225 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 CLUHO75153 1309 aa9.7□□□□□ -0.86
GTF3C1-210ENST00000569394 LOC730098B7Z3J9 87 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ATP2C2O75185 946 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 LRRN2O75325 713 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ABLIM3O94929 683 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 OAZ2O95190 189 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 VNN2O95498 520 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 KRT13P13646 458 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ATF2P15336 505 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 TYMPP19971 482 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 LMO2P25791 158 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 GCLMP48507 274 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 GPR15P49685 360 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 CDH8P55286 799 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 FOXK1P85037 733 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ORC1Q13415 861 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 WDR72Q3MJ13 1102 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 DCAF17Q5H9S7 520 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 TCERG1LQ5VWI1 586 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 TDRD10Q5VZ19 366 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ANKRD40Q6AI12 368 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 SPOPLQ6IQ16 392 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 FAM186BQ8IYM0 893 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ADGRF2Q8IZF7 708 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 GUF1Q8N442 669 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 CXorf38Q8TB03 319 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ITFG1Q8TB96 612 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 PARD3BQ8TEW8 1205 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 TCEAL4Q96EI5 215 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 MCRS1Q96EZ8 462 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 TSG101Q99816 390 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 MYO10Q9HD67 2058 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 WDR6Q9NNW5 1121 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 TMLHEQ9NVH6 421 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 DMAC2Q9NW81 257 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 ZDHHC7Q9NXF8 308 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 CGNQ9P2M7 1197 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 INSL5Q9Y5Q6 135 aa9.69□□□□□ -0.86
GTF3C1-210ENST00000569394 MTMR11A4FU01 709 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 OR6C75A6NL08 312 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 DCXO43602 365 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 XYLBO75191 536 aa9.68□□□□□ -0.86
GTF3C1-210ENST00000569394 RHOP08100 348 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms