RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 GPR20Q99678 358 aa7.07□□□□□ -1.28
CYLD-213ENST00000568744 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
CYLD-213ENST00000568744 TTYH3Q9C0H2 523 aa7.07□□□□□ -1.28
CYLD-213ENST00000568744 BTBD1Q9H0C5 482 aa7.07□□□□□ -1.28
CYLD-213ENST00000568744 STK32BQ9NY57 414 aa7.07□□□□□ -1.28
CYLD-213ENST00000568744 CEP72Q9P209 647 aa7.07□□□□□ -1.28
CYLD-213ENST00000568744 XPR1Q9UBH6 696 aa7.07□□□□□ -1.28
CYLD-213ENST00000568744 AFF4Q9UHB7 1163 aaKnown RBP7.07□□□□□ -1.28
CYLD-213ENST00000568744 PEX14O75381 377 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 ELANEP08246 267 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 SLC11A2P49281 568 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 ARFIP2P53365 341 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 RHBDL3P58872 404 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 RPS16P62249 146 aaKnown RBP7.06□□□□□ -1.28
CYLD-213ENST00000568744 RESTQ13127 1097 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 LIX1LQ8IVB5 337 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 KRT78Q8N1N4 520 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 TMEM132CQ8N3T6 1108 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 PSD4Q8NDX1 1056 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 FBXO41Q8TF61 875 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 SLC25A43Q8WUT9 341 aaPredicted RBP7.06□□□□□ -1.28
CYLD-213ENST00000568744 STK31Q9BXU1 1019 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 ALOXE3Q9BYJ1 711 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 PNPLA8Q9NP80 782 aa7.06□□□□□ -1.28
CYLD-213ENST00000568744 VSX1Q9NZR4 365 aaPredicted RBP7.06□□□□□ -1.28
CYLD-213ENST00000568744 REXO2Q9Y3B8 237 aaKnown RBP7.06□□□□□ -1.28
CYLD-213ENST00000568744 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 UNC119BA6NIH7 251 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 TMEM233B4DJY2 109 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 CFIP05156 583 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 KCNA2P16389 499 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 PRIM2P49643 509 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 AK2P54819 239 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 CXADRP78310 365 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 DGCR2P98153 550 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 SLC25A3Q00325 362 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 FPGSQ05932 587 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 CD300EQ496F6 205 aaPredicted RBP7.05□□□□□ -1.28
CYLD-213ENST00000568744 TAF2Q6P1X5 1199 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 LAYNQ6UX15 382 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 CLNKQ7Z7G1 428 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 SYNE4Q8N205 404 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 CCDC33Q8N5R6 958 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 CPEB3Q8NE35 698 aaKnown RBP7.05□□□□□ -1.28
CYLD-213ENST00000568744 TMEM125Q96AQ2 219 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 SLC46A1Q96NT5 459 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 MYD88Q99836 296 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 C1QTNF3Q9BXJ4 246 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 MS4A7Q9GZW8 240 aaPredicted RBP7.05□□□□□ -1.28
CYLD-213ENST00000568744 SMURF2Q9HAU4 748 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 HESX1Q9UBX0 185 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 RAD54BQ9Y620 910 aa7.05□□□□□ -1.28
CYLD-213ENST00000568744 GAGE12BA1L429 117 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 GAGE12HA6NDE8 117 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 RASSF9O75901 435 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 RPL17P18621 184 aaKnown RBP7.04□□□□□ -1.28
CYLD-213ENST00000568744 LAG3P18627 525 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 DDX6P26196 483 aaKnown RBP eCLIP7.04□□□□□ -1.28
CYLD-213ENST00000568744 OS9Q13438 667 aaPredicted RBP7.04□□□□□ -1.28
CYLD-213ENST00000568744 GEN1Q17RS7 908 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 TIGD2Q4W5G0 525 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 B3GNTL1Q67FW5 361 aaPredicted RBP7.04□□□□□ -1.28
CYLD-213ENST00000568744 LRRC55Q6ZSA7 311 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 SPRED1Q7Z699 444 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 SRLQ86TD4 932 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 ZNF483Q8TF39 744 aaPredicted RBP7.04□□□□□ -1.28
CYLD-213ENST00000568744 RAPGEF4Q8WZA2 1011 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 MAML1Q92585 1016 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 LRIG1Q96JA1 1093 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 ELAC2Q9BQ52 826 aaKnown RBP7.04□□□□□ -1.28
CYLD-213ENST00000568744 DPH1Q9BZG8 443 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 ZNF518BQ9C0D4 1074 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 SMOC2Q9H3U7 446 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 NRDE2Q9H7Z3 1164 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 ETAA1Q9NY74 926 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 CTTNBP2NLQ9P2B4 639 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 KCNE5Q9UJ90 142 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 ITGB1BP2Q9UKP3 347 aa7.04□□□□□ -1.28
CYLD-213ENST00000568744 TRIM43BA6NCK2 446 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 POM121BA6NF01 834 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 SUN1O94901 812 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 FDXRP22570 491 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 MC2RQ01718 297 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 BOP1Q14137 746 aaKnown RBP7.03□□□□□ -1.28
CYLD-213ENST00000568744 LONRF3Q496Y0 759 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 TRIM43Q96BQ3 446 aaPredicted RBP7.03□□□□□ -1.28
CYLD-213ENST00000568744 CCDC138Q96M89 665 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 MOGAT1Q96PD6 335 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 STRBPQ96SI9 672 aaKnown RBP7.03□□□□□ -1.28
CYLD-213ENST00000568744 SPATA5L1Q9BVQ7 753 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 ZNF341Q9BYN7 854 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 COL20A1Q9P218 1284 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 NEU2Q9Y3R4 380 aa7.03□□□□□ -1.28
CYLD-213ENST00000568744 B8ZZF3 427 aa7.02□□□□□ -1.29
CYLD-213ENST00000568744 F8W8V4 182 aa7.02□□□□□ -1.29
CYLD-213ENST00000568744 FOXN3O00409 490 aaPredicted RBP7.02□□□□□ -1.29
CYLD-213ENST00000568744 CDKL5O76039 1030 aa7.02□□□□□ -1.29
CYLD-213ENST00000568744 PARP1P09874 1014 aaKnown RBP7.02□□□□□ -1.29
CYLD-213ENST00000568744 ITGALP20701 1170 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms