RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	CCDC149	Q6ZUS6	474 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	RTL10	Q7L3V2	364 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TRAPPC11	Q7Z392	1133 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TCEAL8	Q8IYN2	117 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	LRRC52	Q8N7C0	313 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	PLEKHO2	Q8TD55	490 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZNF560	Q96MR9	790 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	FNBP1	Q96RU3	617 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TMEM209	Q96SK2	561 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	CGRRF1	Q99675	332 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	RTP3	Q9BQQ7	232 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	CYP4F11	Q9HBI6	524 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	TMEM63C	Q9P1W3	806 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	AFF4	Q9UHB7	1163 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	MUTYH	Q9UIF7	546 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	UST	Q9Y2C2	406 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	MUC3A	Q02505	3323 aa		13.24	□□□□□ -0.29
SCAPER-219	ENST00000568382	CUL9	Q8IWT3	2517 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	CLUH	O75153	1309 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	ARHGEF37	A1IGU5	675 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	OR6C75	A6NL08	312 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	PRRG1	O14668	218 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	N4BP1	O75113	896 aa	Known RBP	13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	CPB1	P15086	417 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	ERCC5	P28715	1186 aa	Predicted RBP	13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	NTHL1	P78549	312 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	BFSP1	Q12934	665 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	GPR17	Q13304	367 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	MYBPC2	Q14324	1141 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	NFIL3	Q16649	462 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	ISM2	Q6H9L7	571 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	METTL23	Q86XA0	190 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZDHHC14	Q8IZN3	488 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	OR10T2	Q8NGX3	314 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	PARD3B	Q8TEW8	1205 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	PGLYRP2	Q96PD5	576 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	HCFC1R1	Q9NWW0	138 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	GDAP2	Q9NXN4	497 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	LIMD1	Q9UGP4	676 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	DSE	Q9UL01	958 aa		13.23	□□□□□ -0.29
SCAPER-219	ENST00000568382	BDP1	A6H8Y1	2624 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	DCX	O43602	365 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	XYLB	O75191	536 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	POU2F2	P09086	479 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	ALAD	P13716	330 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	PRCP	P42785	496 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	TPM4	P67936	248 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	DLG4	P78352	724 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	CLDN10	P78369	228 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	LRRC63	Q05C16	580 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZSCAN23	Q3MJ62	389 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	CEP135	Q66GS9	1140 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	OTOP3	Q7RTS5	596 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	LRRTM3	Q86VH5	581 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	ADSSL1	Q8N142	457 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	THEM5	Q8N1Q8	247 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	PDCL2	Q8N4E4	241 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	TDRD5	Q8NAT2	981 aa	Known RBP	13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	HPDL	Q96IR7	371 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZCWPW1	Q9H0M4	648 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	CRISPLD1	Q9H336	500 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	DNMT3B	Q9UBC3	853 aa	Known RBP	13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	MAFF	Q9ULX9	164 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	POLI	Q9UNA4	740 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	SLC27A5	Q9Y2P5	690 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	SNX9	Q9Y5X1	595 aa		13.22	□□□□□ -0.29
SCAPER-219	ENST00000568382	SYCE3	A1L190	88 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	SMTNL1	A8MU46	457 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	HUS1	O60921	280 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	C4BPA	P04003	597 aa	Known RBP	13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	FSHR	P23945	695 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	NR2F2	P24468	414 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	CDR1	P51861	262 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	TYRO3	Q06418	890 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	MYO1E	Q12965	1108 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	DUSP4	Q13115	394 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	PAK1	Q13153	545 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	ADAM9	Q13443	819 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	SOWAHA	Q2M3V2	549 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	ZCWPW2	Q504Y3	356 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	CENPP	Q6IPU0	288 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	TOP6BL	Q8N6T0	577 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	ACSF2	Q96CM8	615 aa	Predicted RBP	13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	MYADM	Q96S97	322 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	C11orf16	Q9NQ32	467 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	L1RE1	Q9UN81	338 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	FRMD4B	Q9Y2L6	1034 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	INSL5	Q9Y5Q6	135 aa		13.21	□□□□□ -0.29
SCAPER-219	ENST00000568382	DOCK8	Q8NF50	2099 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	MTMR11	A4FU01	709 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	BECN2	A8MW95	431 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	CETN3	O15182	167 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	AKAP3	O75969	853 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	LRG1	P02750	347 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	PRKCSH	P14314	528 aa	Predicted RBP	13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	PTPN2	P17706	415 aa		13.2	□□□□□ -0.3
SCAPER-219	ENST00000568382	CCNE1	P24864	410 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms