RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 KPNB1Q14974 876 aaKnown RBP16.54■□□□□ 0.24
COMMD4-215ENST00000566843 R3HDM1Q15032 1099 aaKnown RBP16.54■□□□□ 0.24
COMMD4-215ENST00000566843 RNASEH2BQ5TBB1 312 aaKnown RBP16.54■□□□□ 0.24
COMMD4-215ENST00000566843 SH3BP5LQ7L8J4 393 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-215ENST00000566843 CPA5Q8WXQ8 436 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 MFSD14AQ96MC6 490 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 DHRS4Q9BTZ2 278 aa16.54■□□□□ 0.24
COMMD4-215ENST00000566843 MAGEA13PA6NCF6 341 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 IPO5O00410 1097 aaKnown RBP16.53■□□□□ 0.24
COMMD4-215ENST00000566843 RIMBP2O15034 1052 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 TM9SF1O15321 606 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 CALCAP01258 141 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
COMMD4-215ENST00000566843 KRT5P13647 590 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 KRT4P19013 534 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 ADRA1DP25100 572 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 RARRES1P49788 294 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 SLC5A9Q2M3M2 681 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 DAB2IPQ5VWQ8 1189 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 FOXB2Q5VYV0 432 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 FAM91A1Q658Y4 838 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 LLGL2Q6P1M3 1020 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 PHC3Q8NDX5 983 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 MZB1Q8WU39 189 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 SKA1Q96BD8 255 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 ZNF212Q9UDV6 495 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 DNPEPQ9ULA0 475 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 SHOC2Q9UQ13 582 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 ZC3H11AO75152 810 aaKnown RBP eCLIP16.53■□□□□ 0.24
COMMD4-215ENST00000566843 TBX10O75333 385 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 TJP3O95049 919 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 ARSEP51690 589 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 GEMIN4P57678 1058 aaKnown RBP16.53■□□□□ 0.24
COMMD4-215ENST00000566843 SESN3P58005 492 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 GPX6P59796 221 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 UBXN2AP68543 259 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 NFX1Q12986 1120 aaKnown RBP16.53■□□□□ 0.24
COMMD4-215ENST00000566843 ABCB5Q2M3G0 1257 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 CENPUQ71F23 418 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 PHLDB2Q86SQ0 1253 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 CCDC127Q96BQ5 260 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 MASTLQ96GX5 879 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 TRIM55Q9BYV6 548 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 PHACTR1Q9C0D0 580 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 HEY2Q9UBP5 337 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 RABGEF1Q9UJ41 708 aa16.53■□□□□ 0.24
COMMD4-215ENST00000566843 MTO1Q9Y2Z2 717 aaKnown RBP16.53■□□□□ 0.24
COMMD4-215ENST00000566843 CAPN9O14815 690 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 GYG2O15488 501 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 TGDSO95455 350 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 ZSCAN5DPP0CG00 497 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 CETN2P41208 172 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 ENPEPQ07075 957 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 GSTA3Q16772 222 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 LIN9Q5TKA1 542 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 ADGRD1Q6QNK2 874 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 MIER3Q7Z3K6 550 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 SP8Q8IXZ3 490 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 RCOR2Q8IZ40 523 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.52■□□□□ 0.24
COMMD4-215ENST00000566843 BICD1Q96G01 975 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 FBXL18Q96ME1 805 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 ZDHHC15Q96MV8 337 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 IDI2Q9BXS1 227 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 FAM192AQ9GZU8 254 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 KCNK13Q9HB14 408 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-215ENST00000566843 DDX43Q9NXZ2 648 aaKnown RBP16.52■□□□□ 0.24
COMMD4-215ENST00000566843 FAM198AQ9UFP1 575 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 DCTN4Q9UJW0 460 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 EXOC7Q9UPT5 735 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 PCDHB2Q9Y5E7 798 aa16.52■□□□□ 0.24
COMMD4-215ENST00000566843 SLC16A4O15374 487 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 LYPLA2O95372 231 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 CD58P19256 250 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 CRKP46108 304 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 NSFP46459 744 aaKnown RBP16.52■□□□□ 0.23
COMMD4-215ENST00000566843 CACNA2D1P54289 1103 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 CDK16Q00536 496 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 GPS1Q13098 491 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 PLEKHA7Q6IQ23 1121 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 RINLQ6ZS11 566 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 SV2AQ7L0J3 742 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 ZBED8Q8IZ13 594 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 BANPQ8N9N5 519 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 ALKBH8Q96BT7 664 aaKnown RBP16.52■□□□□ 0.23
COMMD4-215ENST00000566843 MXRA8Q9BRK3 442 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 MANSC1Q9H8J5 431 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 PDP2Q9P2J9 529 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.23
COMMD4-215ENST00000566843 CLUHO75153 1309 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 COL11A2P13942 1736 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-215ENST00000566843 CFAP69A5D8W1 941 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 A8MXQ7 604 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 H0YIN7 160 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 GDF11O95390 407 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 IL1BP01584 269 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms