RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 POLR3BQ9NW08 1133 aaPredicted RBP18.35■□□□□ 0.53
CDH3-205ENST00000566808 PTPRDP23468 1912 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 M0QZQ0 153 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 OR4Q2P0C623 313 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 GPR17Q13304 367 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 RUNX3Q13761 415 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 UAP1L1Q3KQV9 507 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 CATSPER3Q86XQ3 398 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 KIFAP3Q92845 792 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 EXOC4Q96A65 974 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 ACAP3Q96P50 834 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 POLR3CQ9BUI4 534 aaPredicted RBP18.34■□□□□ 0.53
CDH3-205ENST00000566808 SLC32A1Q9H598 525 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 PTPRHQ9HD43 1115 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 GKN1Q9NS71 199 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 GJB4Q9NTQ9 266 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 ZMYM5Q9UJ78 669 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 KLK13Q9UKR3 277 aa18.34■□□□□ 0.53
CDH3-205ENST00000566808 GON4LQ3T8J9 2241 aa18.33■□□□□ 0.53
CDH3-205ENST00000566808 K7ERI5 159 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 MED24O75448 989 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 MCF2P10911 925 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 CDC25CP30307 473 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 CYP4F8P98187 520 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 STK3Q13188 491 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 NR5A1Q13285 461 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 DMC1Q14565 340 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 CENPPQ6IPU0 288 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 PROSER1Q86XN7 944 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 RPLP0P6Q8NHW5 317 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 TNFRSF25Q93038 417 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 MTMR9Q96QG7 549 aa18.33■□□□□ 0.52
CDH3-205ENST00000566808 ACO2Q99798 780 aaKnown RBP18.33■□□□□ 0.52
CDH3-205ENST00000566808 EVLQ9UI08 416 aaPredicted RBP18.33■□□□□ 0.52
CDH3-205ENST00000566808 PLXND1Q9Y4D7 1925 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 MTMR11A4FU01 709 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 PATE3B3GLJ2 98 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 KRT2P35908 639 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 LMAN2Q12907 356 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 MYBPC2Q14324 1141 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 USP37Q86T82 979 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
CDH3-205ENST00000566808 SMG9Q9H0W8 520 aaKnown RBP18.32■□□□□ 0.52
CDH3-205ENST00000566808 EBF3Q9H4W6 596 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 KIF9Q9HAQ2 790 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 BRMS1Q9HCU9 246 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 HSFX1Q9UBD0 423 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 GPSM3Q9Y4H4 160 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.32■□□□□ 0.52
CDH3-205ENST00000566808 ANK1P16157 1881 aa18.32■□□□□ 0.52
CDH3-205ENST00000566808 CELSR3Q9NYQ7 3312 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 OTOL1A6NHN0 477 aaPredicted RBP18.31■□□□□ 0.52
CDH3-205ENST00000566808 H0Y626 953 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 TRIM16O95361 564 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 AARSP49588 968 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDH3-205ENST00000566808 DGKEP52429 567 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 IRX4P78413 519 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 VEPH1Q14D04 833 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 USP39Q53GS9 565 aaKnown RBP18.31■□□□□ 0.52
CDH3-205ENST00000566808 SOWAHCQ53LP3 525 aaPredicted RBP18.31■□□□□ 0.52
CDH3-205ENST00000566808 MPZL3Q6UWV2 235 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 TTC9BQ8N6N2 239 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 ATAD1Q8NBU5 361 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 P2RY13Q9BPV8 354 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 SLC27A5Q9Y2P5 690 aa18.31■□□□□ 0.52
CDH3-205ENST00000566808 TIMM13Q9Y5L4 95 aaPredicted RBP18.31■□□□□ 0.52
CDH3-205ENST00000566808 MEFVO15553 781 aaPredicted RBP18.3■□□□□ 0.52
CDH3-205ENST00000566808 KALRNO60229 2985 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 PROZP22891 400 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 SIM1P81133 766 aaPredicted RBP18.3■□□□□ 0.52
CDH3-205ENST00000566808 TRIM68Q6AZZ1 485 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 PDZD3Q86UT5 571 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 CMTM8Q8IZV2 173 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 TSTD1Q8NFU3 115 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 ERMNQ8TAM6 284 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 IL21Q9HBE4 155 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 ZSWIM6Q9HCJ5 1215 aa18.3■□□□□ 0.52
CDH3-205ENST00000566808 FBRSL1Q9HCM7 1045 aaKnown RBP18.3■□□□□ 0.52
CDH3-205ENST00000566808 FAM221BA6H8Z2 402 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 ABLIM1O14639 778 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 SOAT2O75908 522 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 RPA1P27694 616 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 AVPR1AP37288 418 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 BFSP1Q12934 665 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 PDGFRLQ15198 375 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 OVOS1Q6IE37 1185 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 TCHPQ9BT92 498 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 SLC46A2Q9BY10 475 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 TMEM134Q9H6X4 195 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 TBX20Q9UMR3 447 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 CYP46A1Q9Y6A2 500 aa18.29■□□□□ 0.52
CDH3-205ENST00000566808 SPAARA0A1B0GVQ0 90 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 UPK3BL1B0FP48 263 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 UPK3BL2E5RIL1 263 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 WNT7AO00755 349 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 LARGE1O95461 756 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 CAPNS1P04632 268 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 HARSP12081 509 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms