RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LIN9Q5TKA1 542 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 RTL10Q7L3V2 364 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 SMRP1Q8NCR6 262 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 CCDC150Q8NCX0 1101 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 MMS19Q96T76 1030 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 ABLIM3O94929 683 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 SPATA31D3P0C874 917 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 P4HA1P13674 534 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 MYL7Q01449 175 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 SMAD4Q13485 552 aaKnown RBP28.03■■■□□ 2.08
NME3-209ENST00000566600 SOWAHAQ2M3V2 549 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 ZNF667Q5HYK9 610 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 SYCE2Q6PIF2 218 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 SPATA31D4Q6ZUB0 917 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 LIMS2Q7Z4I7 341 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 ADGRF2Q8IZF7 708 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 SLC35C1Q96A29 364 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 ASB2Q96Q27 587 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 MED15Q96RN5 788 aa28.03■■■□□ 2.08
NME3-209ENST00000566600 WDR27A2RRH5 827 aa28.02■■■□□ 2.08
NME3-209ENST00000566600 LETM1O95202 739 aaPredicted RBP28.02■■■□□ 2.08
NME3-209ENST00000566600 CLUL1Q15846 466 aa28.02■■■□□ 2.08
NME3-209ENST00000566600 UVSSAQ2YD98 709 aa28.02■■■□□ 2.08
NME3-209ENST00000566600 CES5AQ6NT32 575 aa28.02■■■□□ 2.08
NME3-209ENST00000566600 CCDC149Q6ZUS6 474 aa28.02■■■□□ 2.08
NME3-209ENST00000566600 FBXL13Q8NEE6 735 aa28.02■■■□□ 2.08
NME3-209ENST00000566600 CMASQ8NFW8 434 aaPredicted RBP28.02■■■□□ 2.08
NME3-209ENST00000566600 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.02■■■□□ 2.08
NME3-209ENST00000566600 ZDHHC7Q9NXF8 308 aa28.02■■■□□ 2.08
NME3-209ENST00000566600 NXF1Q9UBU9 619 aaKnown RBP28.02■■■□□ 2.08
NME3-209ENST00000566600 MTCL1Q9Y4B5 1905 aaKnown RBP28.02■■■□□ 2.08
NME3-209ENST00000566600 N4BP1O75113 896 aaKnown RBP28.01■■■□□ 2.07
NME3-209ENST00000566600 TACC1O75410 805 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 ASS1P00966 412 aaKnown RBP28.01■■■□□ 2.07
NME3-209ENST00000566600 ATF2P15336 505 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 ELF1P32519 619 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 GPR17Q13304 367 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 PTCRAQ6ISU1 281 aaPredicted RBP28.01■■■□□ 2.07
NME3-209ENST00000566600 CYP26C1Q6V0L0 522 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 FAM114A1Q8IWE2 563 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 TAS1R2Q8TE23 839 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 ACBD6Q9BR61 282 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 S1PR5Q9H228 398 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 ADAM7Q9H2U9 754 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 THAP9Q9H5L6 903 aa28.01■■■□□ 2.07
NME3-209ENST00000566600 AFF4Q9UHB7 1163 aaKnown RBP28.01■■■□□ 2.07
NME3-209ENST00000566600 GABRDO14764 452 aa28■■■□□ 2.07
NME3-209ENST00000566600 PCSK1P29120 753 aa28■■■□□ 2.07
NME3-209ENST00000566600 TSPY1Q01534 308 aa28■■■□□ 2.07
NME3-209ENST00000566600 SMARCB1Q12824 385 aa28■■■□□ 2.07
NME3-209ENST00000566600 RARS2Q5T160 578 aaKnown RBP28■■■□□ 2.07
NME3-209ENST00000566600 TRIM59Q8IWR1 403 aa28■■■□□ 2.07
NME3-209ENST00000566600 DCP1BQ8IZD4 617 aaKnown RBP28■■■□□ 2.07
NME3-209ENST00000566600 RTP3Q9BQQ7 232 aa28■■■□□ 2.07
NME3-209ENST00000566600 ZCWPW1Q9H0M4 648 aa28■■■□□ 2.07
NME3-209ENST00000566600 DDX43Q9NXZ2 648 aaKnown RBP28■■■□□ 2.07
NME3-209ENST00000566600 GRXCR2A6NFK2 248 aa27.99■■■□□ 2.07
NME3-209ENST00000566600 MBTPS2O43462 519 aa27.99■■■□□ 2.07
NME3-209ENST00000566600 ZMYND10O75800 440 aa27.99■■■□□ 2.07
NME3-209ENST00000566600 HNRNPA1P09651 372 aaKnown RBP eCLIP27.99■■■□□ 2.07
NME3-209ENST00000566600 WARSP23381 471 aaKnown RBP27.99■■■□□ 2.07
NME3-209ENST00000566600 TCEAL8Q8IYN2 117 aa27.99■■■□□ 2.07
NME3-209ENST00000566600 OR10T2Q8NGX3 314 aa27.99■■■□□ 2.07
NME3-209ENST00000566600 CNOT6LQ96LI5 555 aaKnown RBP27.99■■■□□ 2.07
NME3-209ENST00000566600 SNX25Q9H3E2 840 aa27.99■■■□□ 2.07
NME3-209ENST00000566600 RAB20Q9NX57 234 aa27.99■■■□□ 2.07
NME3-209ENST00000566600 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.99■■■□□ 2.07
NME3-209ENST00000566600 PRRG1O14668 218 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 PMM2O15305 246 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 C8AP07357 584 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 HOXA9P31269 272 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 KCNQ1P51787 676 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 CETN1Q12798 172 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 PPM1LQ5SGD2 360 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 C12orf76Q8N812 135 aaPredicted RBP27.98■■■□□ 2.07
NME3-209ENST00000566600 ENOX1Q8TC92 643 aaKnown RBP27.98■■■□□ 2.07
NME3-209ENST00000566600 KBTBD7Q8WVZ9 684 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 RIPOR3Q96MK2 946 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 APOL5Q9BWW9 433 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 RHOBTB2Q9BYZ6 727 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 COQ4Q9Y3A0 265 aa27.98■■■□□ 2.07
NME3-209ENST00000566600 USP15Q9Y4E8 981 aaPredicted RBP27.98■■■□□ 2.07
NME3-209ENST00000566600 CCDC195A0A1B0GUA6 201 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 P4HA2O15460 535 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 PAPLNO95428 1278 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 OR4Q2P0C623 313 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 MTHFRP42898 656 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 FMO5P49326 533 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 TYRO3Q06418 890 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 ADCY1Q08828 1119 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 CBWD6Q4V339 395 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 WDR44Q5JSH3 913 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 TJAP1Q5JTD0 557 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 CBWD3Q5JTY5 395 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 CBWD5Q5RIA9 395 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 ATAT1Q5SQI0 421 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 TMC5Q6UXY8 1006 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 RNF19BQ6ZMZ0 732 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 GPR149Q86SP6 731 aa27.97■■■□□ 2.07
NME3-209ENST00000566600 OSTM1Q86WC4 334 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms