RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 MAFFQ9ULX9 164 aa13.85□□□□□ -0.19
CNEP1R1-208ENST00000566482 POLIQ9UNA4 740 aa13.85□□□□□ -0.19
CNEP1R1-208ENST00000566482 USTQ9Y2C2 406 aa13.85□□□□□ -0.19
CNEP1R1-208ENST00000566482 INSL5Q9Y5Q6 135 aa13.85□□□□□ -0.19
CNEP1R1-208ENST00000566482 MUC3AQ02505 3323 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 MTMR11A4FU01 709 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 BIN1O00499 593 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 N4BP1O75113 896 aaKnown RBP13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 PHACTR2O75167 634 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 LRG1P02750 347 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 PSMC2P35998 433 aaKnown RBP13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 VAMP7P51809 220 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 AP3M2P53677 418 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 BIRC3Q13489 604 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 TRPC3Q13507 836 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 SOWAHAQ2M3V2 549 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 SLC39A12Q504Y0 691 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 C1orf220Q5T0J3 134 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 OTOP3Q7RTS5 596 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 OSTM1Q86WC4 334 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 ADGRF2Q8IZF7 708 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 TMEM86AQ8N2M4 240 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 TOP6BLQ8N6T0 577 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 EEF2KMTQ96G04 330 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 TSG101Q99816 390 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 CRISPLD1Q9H336 500 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 HCFC1R1Q9NWW0 138 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 MUTYHQ9UIF7 546 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 BDP1A6H8Y1 2624 aa13.84□□□□□ -0.19
CNEP1R1-208ENST00000566482 PI4K2BG5E9Z4 385 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 PSMA7O14818 248 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 DCXO43602 365 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 VNN1O95497 513 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 KRT13P13646 458 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 BMP6P22004 513 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 FSHRP23945 695 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 GBP2P32456 591 aaPredicted RBP13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 CDR1P51861 262 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 PMS1P54277 932 aaKnown RBP13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 MYL6P60660 151 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 TWF1Q12792 350 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 DUSP4Q13115 394 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 STIM1Q13586 685 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 MORC3Q14149 939 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 CAMK4Q16566 473 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 GET4Q7L5D6 327 aaPredicted RBP13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 LIMS2Q7Z4I7 341 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 LRRTM3Q86VH5 581 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 ZDHHC14Q8IZN3 488 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 TTC9BQ8N6N2 239 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 ATAD1Q8NBU5 361 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 SPATA18Q8TC71 538 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 ACSF2Q96CM8 615 aaPredicted RBP13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 MYADMQ96S97 322 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 EPHX3Q9H6B9 360 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 DDX43Q9NXZ2 648 aaKnown RBP13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 DNMT3BQ9UBC3 853 aaKnown RBP13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 YIPF1Q9Y548 306 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 NCOR1O75376 2440 aa13.83□□□□□ -0.2
CNEP1R1-208ENST00000566482 TRIM49BA6NDI0 452 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 GABRDO14764 452 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 IKBKBO14920 756 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 CETN3O15182 167 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 HCRTO43612 131 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 STAU1O95793 577 aaKnown RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 RHOP08100 348 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 TRIM49P0CI25 452 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 TRIM49CP0CI26 452 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 ACAT1P24752 427 aaKnown RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 CCNE1P24864 410 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 ATICP31939 592 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 LHX1P48742 406 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 TNNC1P63316 161 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 MYL7Q01449 175 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 TSPY1Q01534 308 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 LRRC63Q05C16 580 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 NCOA4Q13772 614 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 ZACNQ401N2 412 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 PABPC1LQ4VXU2 614 aaKnown RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 INTS8Q75QN2 995 aaKnown RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 DPH6Q7L8W6 267 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 ZC3H3Q8IXZ2 948 aaKnown RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 DCP1BQ8IZD4 617 aaKnown RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 KBTBD7Q8WVZ9 684 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 LMBRD1Q9NUN5 540 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 SLC27A5Q9Y2P5 690 aa13.82□□□□□ -0.2
CNEP1R1-208ENST00000566482 DOCK6Q96HP0 2047 aa13.81□□□□□ -0.2
CNEP1R1-208ENST00000566482 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
CNEP1R1-208ENST00000566482 SOAT2O75908 522 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms