RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 POLR2BP30876 1174 aaKnown RBP16.9■□□□□ 0.3
CDH3-204ENST00000565453 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 EPHB3P54753 998 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 TFAMQ00059 246 aaKnown RBP16.9■□□□□ 0.3
CDH3-204ENST00000565453 PKP1Q13835 747 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 SLC39A12Q504Y0 691 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 VITQ6UXI7 678 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 EPM2AIP1Q7L775 607 aaPredicted RBP16.9■□□□□ 0.3
CDH3-204ENST00000565453 ASCL5Q7RTU5 278 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 FRMD5Q7Z6J6 570 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 DNAJB7Q7Z6W7 309 aaPredicted RBP16.9■□□□□ 0.3
CDH3-204ENST00000565453 METTL23Q86XA0 190 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 GPD1LQ8N335 351 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 DNASE1L2Q92874 299 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 PSMG2Q969U7 264 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 ZNF560Q96MR9 790 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 OSBPL6Q9BZF3 934 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 PCIF1Q9H4Z3 704 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 ZNF334Q9HCZ1 680 aaPredicted RBP16.9■□□□□ 0.3
CDH3-204ENST00000565453 MTF2Q9Y483 593 aaPredicted RBP16.9■□□□□ 0.3
CDH3-204ENST00000565453 ASB3Q9Y575 518 aa16.9■□□□□ 0.3
CDH3-204ENST00000565453 A0A1W2PRU2 124 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 PRR23AA6NEV1 266 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 KIAA0391O15091 583 aaKnown RBP16.89■□□□□ 0.29
CDH3-204ENST00000565453 EIF3DO15371 548 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDH3-204ENST00000565453 ITGB3P05106 788 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 PNPLA4P41247 253 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 VIPR2P41587 438 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 EHHADHQ08426 723 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 GRM2Q14416 872 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 GAREM2Q75VX8 874 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 THEM5Q8N1Q8 247 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 IQUBQ8NA54 791 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 ZSCAN18Q8TBC5 510 aaPredicted RBP16.89■□□□□ 0.29
CDH3-204ENST00000565453 KCNG4Q8TDN1 519 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 MKNK1Q9BUB5 465 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 GPR88Q9GZN0 384 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 PDE11AQ9HCR9 933 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 LTB4R2Q9NPC1 389 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 SIX4Q9UIU6 781 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 PCDHA7Q9UN72 937 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 AGAP1Q9UPQ3 857 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 TCHHQ07283 1943 aa16.89■□□□□ 0.29
CDH3-204ENST00000565453 ATF6P18850 670 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 CD72P21854 359 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 TUFMP49411 452 aaKnown RBP16.88■□□□□ 0.29
CDH3-204ENST00000565453 ASIC1P78348 528 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 AMPD3Q01432 767 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 SMARCB1Q12824 385 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 FOXD4L6Q3SYB3 417 aaPredicted RBP16.88■□□□□ 0.29
CDH3-204ENST00000565453 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 FOXD4L3Q6VB84 417 aaPredicted RBP16.88■□□□□ 0.29
CDH3-204ENST00000565453 TPRG1Q6ZUI0 275 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 STXBP4Q6ZWJ1 553 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 PDCL2Q8N4E4 241 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 LRRC52Q8N7C0 313 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 ZNF507Q8TCN5 953 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 C2orf15Q8WU43 125 aaKnown RBP16.88■□□□□ 0.29
CDH3-204ENST00000565453 CACTINQ8WUQ7 758 aaKnown RBP16.88■□□□□ 0.29
CDH3-204ENST00000565453 RSPRY1Q96DX4 576 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 LPIN3Q9BQK8 851 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 TRMT61BQ9BVS5 477 aaKnown RBP16.88■□□□□ 0.29
CDH3-204ENST00000565453 MAGEF1Q9HAY2 307 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 TRPV5Q9NQA5 729 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 HEBP1Q9NRV9 189 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 ITGA11Q9UKX5 1188 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 L1RE1Q9UN81 338 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 PTPRJQ12913 1337 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 MIA3Q5JRA6 1907 aa16.88■□□□□ 0.29
CDH3-204ENST00000565453 FAM170BA6NMN3 283 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
CDH3-204ENST00000565453 TGFB1I1O43294 461 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 HAPLN1P10915 354 aaPredicted RBP16.87■□□□□ 0.29
CDH3-204ENST00000565453 PSMC3P17980 439 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 TARSP26639 723 aaKnown RBP16.87■□□□□ 0.29
CDH3-204ENST00000565453 CDR1P51861 262 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 FZD5Q13467 585 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 UBXN2BQ14CS0 331 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 STXBP5Q5T5C0 1151 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 RESP18Q5W5W9 173 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 UNC13DQ70J99 1090 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 ITIH5Q86UX2 942 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 CBWD2Q8IUF1 395 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 C1orf210Q8IVY1 113 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 MAML2Q8IZL2 1156 aaPredicted RBP16.87■□□□□ 0.29
CDH3-204ENST00000565453 ZNF687Q8N1G0 1237 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 SPPL2BQ8TCT7 592 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 DEPDC1BQ8WUY9 529 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 SEPT5Q99719 369 aaPredicted RBP16.87■□□□□ 0.29
CDH3-204ENST00000565453 MTMR12Q9C0I1 747 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 BRD9Q9H8M2 597 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 IL21Q9HBE4 155 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 TMLHEQ9NVH6 421 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 INTS13Q9NVM9 706 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 GDAP2Q9NXN4 497 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 HSPBP1Q9NZL4 362 aa16.87■□□□□ 0.29
CDH3-204ENST00000565453 HEPACAM2A8MVW5 462 aa16.86■□□□□ 0.29
CDH3-204ENST00000565453 ARNTLO00327 626 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms