RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PCDHA7Q9UN72 937 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 SIT1Q9Y3P8 196 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 TCHHQ07283 1943 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 A0A1W2PRU2 124 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 KANSL1LA0AUZ9 987 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 KPNA7A9QM74 516 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 PROB1E7EW31 1015 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 POLR2DO15514 142 aaKnown RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 GFRA3O60609 400 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 LDHAP00338 332 aaKnown RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 PDIA4P13667 645 aaKnown RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 ATF6P18850 670 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 CD72P21854 359 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 CASP1P29466 404 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 NBL1P41271 181 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 EPHB3P54753 998 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 PFKPQ01813 784 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 SLC39A12Q504Y0 691 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 STXBP5Q5T5C0 1151 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 LMBRD2Q68DH5 695 aaPredicted RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 VITQ6UXI7 678 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 EPM2AIP1Q7L775 607 aaPredicted RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 FRMD5Q7Z6J6 570 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 LRRTM3Q86VH5 581 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 METTL23Q86XA0 190 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 GPD1LQ8N335 351 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 IQUBQ8NA54 791 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 NOC3LQ8WTT2 800 aaKnown RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 SMARCD2Q92925 531 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 SHDQ96IW2 340 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 ZNF560Q96MR9 790 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 SEPT5Q99719 369 aaPredicted RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 MTMR12Q9C0I1 747 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 LRRC27Q9C0I9 530 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 BLZF1Q9H2G9 400 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 HSFX1Q9UBD0 423 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 SIX4Q9UIU6 781 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 AGAP1Q9UPQ3 857 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 MTF2Q9Y483 593 aaPredicted RBP10.82□□□□□ -0.68
CMTM3-209ENST00000565003 PTPRJQ12913 1337 aa10.82□□□□□ -0.68
CMTM3-209ENST00000565003 COL4A2P08572 1712 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 USP34Q70CQ2 3546 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 SHISA7A6NL88 538 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 EIF3DO15371 548 aaKnown RBP eCLIP10.81□□□□□ -0.68
CMTM3-209ENST00000565003 PNPLA4P41247 253 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 VIPR2P41587 438 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 ALDH1A3P47895 512 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 ME1P48163 572 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 AMPD3Q01432 767 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 PRKCQQ04759 706 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 EHHADHQ08426 723 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 FAM26FQ5R3K3 315 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 RESP18Q5W5W9 173 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 TPRG1Q6ZUI0 275 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 STXBP4Q6ZWJ1 553 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 GAREM2Q75VX8 874 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 ASCL5Q7RTU5 278 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 DNAJB7Q7Z6W7 309 aaPredicted RBP10.81□□□□□ -0.68
CMTM3-209ENST00000565003 CBWD2Q8IUF1 395 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 THEM5Q8N1Q8 247 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 PDCL2Q8N4E4 241 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 PSMG2Q969U7 264 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 RSPRY1Q96DX4 576 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 C7orf25Q9BPX7 421 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 MKNK1Q9BUB5 465 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 SLITRK6Q9H5Y7 841 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 TRPV4Q9HBA0 871 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 HEBP1Q9NRV9 189 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 HSPBP1Q9NZL4 362 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 ITGA11Q9UKX5 1188 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 L1RE1Q9UN81 338 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 DMDP11532 3685 aa10.81□□□□□ -0.68
CMTM3-209ENST00000565003 ZFHX2Q9C0A1 2572 aaPredicted RBP10.8□□□□□ -0.68
CMTM3-209ENST00000565003 MIA3Q5JRA6 1907 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.8□□□□□ -0.68
CMTM3-209ENST00000565003 PRR23AA6NEV1 266 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 KIAA0391O15091 583 aaKnown RBP10.8□□□□□ -0.68
CMTM3-209ENST00000565003 TGFB1I1O43294 461 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 HCRTO43612 131 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 KRT19P08727 400 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 TMEM191BP0C7N4 346 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 PSMC3P17980 439 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 TARSP26639 723 aaKnown RBP10.8□□□□□ -0.68
CMTM3-209ENST00000565003 TUFMP49411 452 aaKnown RBP10.8□□□□□ -0.68
CMTM3-209ENST00000565003 BFSP1Q12934 665 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 UBXN2BQ14CS0 331 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 MGAT5BQ3V5L5 792 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 ATL3Q6DD88 541 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 UNC13DQ70J99 1090 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 NELFCDQ8IXH7 590 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 GRAMD1CQ8IYS0 662 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 LRRC52Q8N7C0 313 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 OR5B17Q8NGF7 314 aa10.8□□□□□ -0.68
CMTM3-209ENST00000565003 ZNF507Q8TCN5 953 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms