RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TMEM206Q9H813 350 aa21.61■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PSMG1O95456 288 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SKIP12755 728 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SMTNL2Q2TAL5 461 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 NLRX1Q86UT6 975 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SLC9A9Q8IVB4 645 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 FAM136AQ96C01 138 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 NHSQ6T4R5 1651 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TYROBPO43914 113 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 CCDC22O60826 627 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 KRT1P04264 644 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 NFIL3Q16649 462 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 IL31RAQ8NI17 732 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 MANSC1Q9H8J5 431 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 NYAP2Q9P242 653 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TNRC6CQ9HCJ0 1690 aaKnown RBP21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TAF1LQ8IZX4 1826 aa21.6■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TCP10L2B9ZVM9 353 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 GPX6P59796 221 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 ROR2Q01974 943 aaKnown RBP21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 NFX1Q12986 1120 aaKnown RBP21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 UGCGQ16739 394 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TMEM270Q6UE05 265 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 RHOT1Q8IXI2 618 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PYROXD1Q8WU10 500 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 GBP5Q96PP8 586 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 MECRQ9BV79 373 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 WDR35Q9P2L0 1181 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 IVNS1ABPQ9Y6Y0 642 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 F8VP50 259 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 MYL2P10916 166 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 ITGB5P18084 799 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PGM1P36871 562 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 RPS6KA3P51812 740 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SLC45A4Q5BKX6 768 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 XKR9Q5GH70 373 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 HIPK4Q8NE63 616 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 BICD1Q96G01 975 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TSSK1BQ9BXA7 367 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PCMTD2Q9NV79 361 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 KLHL33A6NCF5 533 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 C2CD2LO14523 706 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 DNALI1O14645 258 aaPredicted RBP21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PPEF1O14829 653 aaPredicted RBP21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 MAGEB2O15479 319 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PROSCO94903 275 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 MAN1A1P33908 653 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 RARRES1P49788 294 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 KCNT1Q5JUK3 1230 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 FNBP1LQ5T0N5 605 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PPFIBP2Q8ND30 876 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 CFAP61Q8NHU2 1237 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 NSL1Q96IY1 281 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TRIM55Q9BYV6 548 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 FAM198AQ9UFP1 575 aa21.59■■□□□ 1.05
MAP1LC3B-206ENST00000564844 DENND3A2RUS2 1198 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 B2RBV5 119 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SLC26A4O43511 780 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 NPTXRO95502 500 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 TNNI1P19237 187 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SLC34A1Q06495 639 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SEZ6Q53EL9 994 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 GALNT15Q8N3T1 639 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 PI4KBQ9UBF8 816 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 SMG5Q9UPR3 1016 aaKnown RBP21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 LRCH1Q9Y2L9 728 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 ACTL7BQ9Y614 415 aa21.58■■□□□ 1.05
MAP1LC3B-206ENST00000564844 E5RJQ4 531 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PYGLP06737 847 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 STAT2P52630 851 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 IRX4P78413 519 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SMAD1Q15797 465 aaKnown RBP21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MAIP1Q8WWC4 291 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PAFAH2Q99487 392 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 STRA6Q9BX79 667 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SHCBP1LQ9BZQ2 653 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 NMUR2Q9GZQ4 415 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 KCNH7Q9NS40 1196 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PSMC3IPQ9P2W1 217 aaPredicted RBP21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ASB3Q9Y575 518 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 UMODL1Q5DID0 1318 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SBF2Q86WG5 1849 aa21.58■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TCRBV7S3A2A0A539 114 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PRPF4O43172 522 aaKnown RBP eCLIP21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 UNGP13051 313 aaPredicted RBP21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MUTP22033 750 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 RANBP1P43487 201 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SPP2Q13103 211 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 LAMB3Q13751 1172 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SYDE1Q6ZW31 735 aaPredicted RBP21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SPATA31A6Q5VVP1 1343 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MYPNQ86TC9 1320 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SIGLEC16A6NMB1 481 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 LIASO43766 372 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 FAM155BO75949 473 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GDF10P55107 478 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 THTPAQ9BU02 230 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 OCEL1Q9H607 264 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 KRT82Q9NSB4 513 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms