RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PRAG1Q86YV5 1406 aa6.22□□□□□ -1.41
LINC00254-201ENST00000563416 NRXN1Q9ULB1 1477 aa6.22□□□□□ -1.41
LINC00254-201ENST00000563416 ASXL1Q8IXJ9 1541 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 GPANK1O95872 356 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 CD1AP06126 327 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 EPHB1P54762 984 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 ZNF280AP59817 542 aaPredicted RBP6.21□□□□□ -1.42
LINC00254-201ENST00000563416 TGFB2P61812 414 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 PIN1Q13526 163 aaPredicted RBP6.21□□□□□ -1.42
LINC00254-201ENST00000563416 USP45Q70EL2 814 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 NOL8Q76FK4 1167 aaKnown RBP6.21□□□□□ -1.42
LINC00254-201ENST00000563416 ARHGEF19Q8IW93 802 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 ULK2Q8IYT8 1036 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 FAM43AQ8N2R8 423 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 C3orf20Q8ND61 904 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 IL17RDQ8NFM7 739 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 TBC1D15Q8TC07 691 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 LARP4BQ92615 738 aaKnown RBP6.21□□□□□ -1.42
LINC00254-201ENST00000563416 PNKPQ96T60 521 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 TEX101Q9BY14 249 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 GNL3LQ9NVN8 582 aaKnown RBP6.21□□□□□ -1.42
LINC00254-201ENST00000563416 HS3ST4Q9Y661 456 aa6.21□□□□□ -1.42
LINC00254-201ENST00000563416 ARHGEF28Q8N1W1 1705 aaKnown RBP6.2□□□□□ -1.42
LINC00254-201ENST00000563416 PIK3C2GO75747 1445 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 CENPVL1A0A0U1RR11 272 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 CDKL5O76039 1030 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 POU2F2P09086 479 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 PF4V1P10720 104 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 SMARCA1P28370 1054 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 HMGA2P52926 109 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 MCL1Q07820 350 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 RESTQ13127 1097 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 KHDC1Q4VXA5 237 aaKnown RBP6.2□□□□□ -1.42
LINC00254-201ENST00000563416 TMEM132CQ8N3T6 1108 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 FBXO41Q8TF61 875 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 MED15Q96RN5 788 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 MLST8Q9BVC4 326 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 MTO1Q9Y2Z2 717 aaKnown RBP6.2□□□□□ -1.42
LINC00254-201ENST00000563416 RGPD8O14715 1765 aaPredicted RBP6.2□□□□□ -1.42
LINC00254-201ENST00000563416 RPGRIP1LQ68CZ1 1315 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 ROBO1Q9Y6N7 1651 aa6.2□□□□□ -1.42
LINC00254-201ENST00000563416 PTPRUQ92729 1446 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 MARCH11A6NNE9 402 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 ERN1O75460 977 aaKnown RBP6.19□□□□□ -1.42
LINC00254-201ENST00000563416 ABLIM3O94929 683 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 FOSP01100 380 aaPredicted RBP6.19□□□□□ -1.42
LINC00254-201ENST00000563416 SLPIP03973 132 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 GNAI3P08754 354 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 FTH1P19P0C7X4 201 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 MALP21145 153 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 FGFR4P22455 802 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 ZFP36P26651 326 aaKnown RBP6.19□□□□□ -1.42
LINC00254-201ENST00000563416 INHBCP55103 352 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 GNAI1P63096 354 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 DSC2Q02487 901 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 TAP1Q03518 808 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 OCA2Q04671 838 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 DPTQ07507 201 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 PGS1Q32NB8 556 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 ODR4Q5SWX8 454 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 PRR18Q8N4B5 295 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 RGMAQ96B86 450 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 DMRTA2Q96SC8 542 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 VRK1Q99986 396 aaPredicted RBP6.19□□□□□ -1.42
LINC00254-201ENST00000563416 ZSWIM1Q9BR11 485 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 POLR3GLQ9BT43 218 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 MRIQ9BWK5 157 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 CYP4F11Q9HBI6 524 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 KMT5AQ9NQR1 393 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 SIDT1Q9NXL6 827 aaKnown RBP6.19□□□□□ -1.42
LINC00254-201ENST00000563416 KCNE5Q9UJ90 142 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 ING1Q9UK53 422 aaPredicted RBP6.19□□□□□ -1.42
LINC00254-201ENST00000563416 PNMA8BQ9ULN7 279 aaPredicted RBP6.19□□□□□ -1.42
LINC00254-201ENST00000563416 MAP3K2Q9Y2U5 619 aa6.19□□□□□ -1.42
LINC00254-201ENST00000563416 NHSL1Q5SYE7 1610 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 TRPM1Q7Z4N2 1603 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 B3GALT2O43825 422 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 LPXNO60711 386 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 SLC43A1O75387 559 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 PRSS23O95084 383 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 FTLP02792 175 aaPredicted RBP6.18□□□□□ -1.42
LINC00254-201ENST00000563416 ANXA1P04083 346 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 CYP2C19P33261 490 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 FXR1P51114 621 aaKnown RBP eCLIP6.18□□□□□ -1.42
LINC00254-201ENST00000563416 NOMO3P69849 1222 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 BLOC1S1P78537 153 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 HSD11B2P80365 405 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 NOMO2Q5JPE7 1267 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 UTP14CQ5TAP6 766 aaKnown RBP6.18□□□□□ -1.42
LINC00254-201ENST00000563416 CCDC181Q5TID7 509 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 SLC4A10Q6U841 1118 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 ZNF365Q70YC5 407 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 MRGPRGQ86SM5 289 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 LCORLQ8N3X6 602 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 RNF31Q96EP0 1072 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 MARS2Q96GW9 593 aaKnown RBP6.18□□□□□ -1.42
LINC00254-201ENST00000563416 CAMKK2Q96RR4 588 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 ALOXE3Q9BYJ1 711 aa6.18□□□□□ -1.42
LINC00254-201ENST00000563416 DKK2Q9UBU2 259 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms