RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ZDHHC7Q9NXF8 308 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 PRKAG3Q9UGI9 489 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 DSEQ9UL01 958 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 NME7Q9Y5B8 376 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 ARHGEF37A1IGU5 675 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 LOC730098B7Z3J9 87 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 PSMA7O14818 248 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 CETN3O15182 167 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 HCRTO43612 131 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 LRRN2O75325 713 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 C8AP07357 584 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 GCLMP48507 274 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 AP3M2P53677 418 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 FKBP3Q00688 224 aaKnown RBP9.18□□□□□ -0.94
UBR1-204ENST00000563239 GPR17Q13304 367 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 UVSSAQ2YD98 709 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 TPGS2Q68CL5 300 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 KLHL10Q6JEL2 608 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 CES5AQ6NT32 575 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 RBM43Q6ZSC3 357 aaKnown RBP9.18□□□□□ -0.94
UBR1-204ENST00000563239 INTS8Q75QN2 995 aaKnown RBP9.18□□□□□ -0.94
UBR1-204ENST00000563239 USP37Q86T82 979 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 TOP6BLQ8N6T0 577 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 SLC7A14Q8TBB6 771 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.942e-13■■■□□ 16
UBR1-204ENST00000563239 PKMYT1Q99640 499 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 PHF7Q9BWX1 381 aaPredicted RBP9.18□□□□□ -0.94
UBR1-204ENST00000563239 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
UBR1-204ENST00000563239 ZCWPW1Q9H0M4 648 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 NUP62CLQ9H1M0 184 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 VRTNQ9H8Y1 702 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 TMLHEQ9NVH6 421 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 AFF4Q9UHB7 1163 aaKnown RBP9.18□□□□□ -0.94
UBR1-204ENST00000563239 POLIQ9UNA4 740 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 CTNND2Q9UQB3 1225 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 FAM50BQ9Y247 325 aa9.18□□□□□ -0.94
UBR1-204ENST00000563239 PIEZO1Q92508 2521 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 C2orf16Q68DN1 1984 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 MTMR11A4FU01 709 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 NRG2O14511 850 aaPredicted RBP9.17□□□□□ -0.94
UBR1-204ENST00000563239 SLC16A3O15427 465 aaKnown RBP9.17□□□□□ -0.94
UBR1-204ENST00000563239 CCL16O15467 120 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 HUS1O60921 280 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 N4BP1O75113 896 aaKnown RBP9.17□□□□□ -0.94
UBR1-204ENST00000563239 POU2F2P09086 479 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 HNRNPA1P09651 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBR1-204ENST00000563239 WARSP23381 471 aaKnown RBP9.17□□□□□ -0.94
UBR1-204ENST00000563239 LMO2P25791 158 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 HOXA9P31269 272 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 ATICP31939 592 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 PPP1R2P41236 205 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 MTHFRP42898 656 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 CDR1P51861 262 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 STX17P56962 302 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 ADCY1Q08828 1119 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 MYO1EQ12965 1108 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 BIRC3Q13489 604 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 STIM1Q13586 685 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 NCOA4Q13772 614 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 ATAT1Q5SQI0 421 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 LIN9Q5TKA1 542 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 POTEHQ6S545 545 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 CYP26C1Q6V0L0 522 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 RTL10Q7L3V2 364 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 DPH6Q7L8W6 267 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 FILIP1Q7Z7B0 1213 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 METTL23Q86XA0 190 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 ADGRF2Q8IZF7 708 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 TMEM86AQ8N2M4 240 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 TTC9BQ8N6N2 239 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 ATAD1Q8NBU5 361 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 TAS1R2Q8TE23 839 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 SMG7Q92540 1137 aaKnown RBP9.17□□□□□ -0.94
UBR1-204ENST00000563239 SEMA4DQ92854 862 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 RIPOR3Q96MK2 946 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 CEP63Q96MT8 703 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 NECTIN4Q96NY8 510 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 PGLYRP2Q96PD5 576 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 TSG101Q99816 390 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 MRPL45Q9BRJ2 306 aaKnown RBP9.17□□□□□ -0.94
UBR1-204ENST00000563239 SDCBP2Q9H190 292 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 WDR6Q9NNW5 1121 aaKnown RBP9.17□□□□□ -0.94
UBR1-204ENST00000563239 HCFC1R1Q9NWW0 138 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 DPP7Q9UHL4 492 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 MAFFQ9ULX9 164 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 INSL5Q9Y5Q6 135 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 DENND4AQ7Z401 1863 aa9.17□□□□□ -0.94
UBR1-204ENST00000563239 PHACTR2O75167 634 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 ATP2C2O75185 946 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 TACC1O75410 805 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 ASS1P00966 412 aaKnown RBP9.16□□□□□ -0.94
UBR1-204ENST00000563239 HLA-DRAP01903 254 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 FAM163BP0C2L3 166 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 EPB41P11171 864 aaKnown RBP9.16□□□□□ -0.94
UBR1-204ENST00000563239 KRT13P13646 458 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CPB1P15086 417 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 ACAT1P24752 427 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms