RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ITGB3P05106 788 aa24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 HNRNPH3P31942 346 aaKnown RBP24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 WDR44Q5JSH3 913 aa24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 IQCEQ6IPM2 695 aa24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 TMC7Q7Z402 723 aa24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 TMEM139Q8IV31 216 aa24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 SYN2Q92777 582 aaPredicted RBP24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 DNAJC12Q9UKB3 198 aa24.07■■□□□ 1.44
SYNGR3-202ENST00000562045 XPOTO43592 962 aaKnown RBP24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 NCOA4Q13772 614 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 RAPGEF1Q13905 1077 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 CCDC85BQ15834 202 aaPredicted RBP24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 PTPROQ16827 1216 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 TIGD5Q53EQ6 642 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 GJB7Q6PEY0 223 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 ZSCAN30Q86W11 494 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 MICAL1Q8TDZ2 1067 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 FAM81BQ96LP2 452 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 STK33Q9BYT3 514 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 IMPG2Q9BZV3 1241 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 ENTPD7Q9NQZ7 604 aa24.06■■□□□ 1.44
SYNGR3-202ENST00000562045 CARNS1A5YM72 827 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 C2CD2LO14523 706 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 ARHGAP6O43182 974 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 LRRN2O75325 713 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 GTF2F1P35269 517 aaKnown RBP eCLIP24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 MEA1Q16626 185 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 RTP2Q5QGT7 225 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 FAM171A1Q5VUB5 890 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 TMTC1Q8IUR5 882 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 HERC2P3Q9BVR0 1158 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 CHST7Q9NS84 486 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 LMCD1Q9NZU5 365 aa24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 SF3B1O75533 1304 aaKnown RBP eCLIP24.05■■□□□ 1.44
SYNGR3-202ENST00000562045 CTSAP10619 480 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 POLR2BP30876 1174 aaKnown RBP24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 TRPC3Q13507 836 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 TCEAL5Q5H9L2 206 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 SFMBT2Q5VUG0 894 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 CYP26C1Q6V0L0 522 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 FMNL3Q8IVF7 1028 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 PPM1EQ8WY54 764 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 UBE2TQ9NPD8 197 aaPredicted RBP24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 TSC2P49815 1807 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 TKTP29401 623 aaKnown RBP24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 JAM2P57087 298 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 PTPN14Q15678 1187 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 KIAA0319Q5VV43 1072 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 RBM23Q86U06 439 aaKnown RBP24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 ARHGEF19Q8IW93 802 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 PPM1KQ8N3J5 372 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 AJAP1Q9UKB5 411 aaPredicted RBP24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 AGAP1Q9UPQ3 857 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 NUB1Q9Y5A7 615 aa24.04■■□□□ 1.44
SYNGR3-202ENST00000562045 C2orf71A6NGG8 1288 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 PER2O15055 1255 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 LILRB3O75022 631 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 CXCL14O95715 111 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 CST3P01034 146 aaPredicted RBP24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 MFAP3P55082 362 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 LILRA4P59901 499 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 CDK17Q00537 523 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 GCNT1Q02742 428 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 WDR59Q6PJI9 974 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 CEP57Q86XR8 500 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 MRPL43Q8N983 215 aaKnown RBP24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 ELMO3Q96BJ8 720 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 PI4K2AQ9BTU6 479 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 AIPL1Q9NZN9 384 aa24.03■■□□□ 1.44
SYNGR3-202ENST00000562045 F8VZ95 297 aa24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 KRT19P08727 400 aa24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 CA8P35219 290 aa24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 AARSP49588 968 aaKnown RBP eCLIP24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 DRAP1Q14919 205 aaPredicted RBP24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 SGSM1Q2NKQ1 1148 aa24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 PRSS55Q6UWB4 352 aaPredicted RBP24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 ENOSF1Q7L5Y1 443 aa24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 NSUN3Q9H649 340 aaKnown RBP24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 ITGA11Q9UKX5 1188 aa24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 PYCARDQ9ULZ3 195 aa24.02■■□□□ 1.44
SYNGR3-202ENST00000562045 ASS1P00966 412 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 FGFR3P22607 806 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 MSNP26038 577 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 STAT1P42224 750 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 GLUD2P49448 558 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 DSG1Q02413 1049 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 SMC1AQ14683 1233 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 USP41Q3LFD5 358 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 E4F1Q66K89 784 aaPredicted RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 TAF4BQ92750 862 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 SUSD3Q96L08 255 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 STXBP5LQ9Y2K9 1186 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 R3HCC1Q9Y3T6 440 aaKnown RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 TIMM13Q9Y5L4 95 aaPredicted RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 PLXNA3P51805 1871 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 CLSTN1O94985 981 aa24.01■■□□□ 1.43
SYNGR3-202ENST00000562045 RPL17P18621 184 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms