RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CASP4P49662 377 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 STK4Q13043 487 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 BECN1Q14457 450 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 TEAD2Q15562 447 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 MGAT5BQ3V5L5 792 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 SV2CQ496J9 727 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 PRSS36Q5K4E3 855 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 STXBP5Q5T5C0 1151 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 CYP4A22Q5TCH4 519 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 CWF19L1Q69YN2 538 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 TANGO2Q6ICL3 276 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 IQCEQ6IPM2 695 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 CENPPQ6IPU0 288 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 THEM5Q8N1Q8 247 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 ELMOD1Q8N336 334 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 KIAA0895Q8NCT3 520 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 CACTINQ8WUQ7 758 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 PI4K2AQ9BTU6 479 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 DNAJC25Q9H1X3 360 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 ZNF334Q9HCZ1 680 aaPredicted RBP10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 EXOC1Q9NV70 894 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 SIX4Q9UIU6 781 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 L1RE1Q9UN81 338 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 MAPK8IP1Q9UQF2 711 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 SNX9Q9Y5X1 595 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 TSC2P49815 1807 aa10.21□□□□□ -0.78
NSMCE1-203ENST00000562039 A0A1W2PRU2 124 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 ANHXE9PGG2 379 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 EIF3DO15371 548 aaKnown RBP eCLIP10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 EXOC3O60645 756 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 LRRN2O75325 713 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 PAPLNO95428 1278 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 SRFP11831 508 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 TNNI1P19237 187 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 CD72P21854 359 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 VIPR2P41587 438 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 ALDH1A3P47895 512 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 RBP5P82980 135 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 CYP4F8P98187 520 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 EHHADHQ08426 723 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 GPR17Q13304 367 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 PLD1Q13393 1074 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 SNW1Q13573 536 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 SNRNP35Q16560 246 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 FAM78AQ5JUQ0 283 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 HS2ST1Q7LGA3 356 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 KMT2EQ8IZD2 1858 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 PDCL2Q8N4E4 241 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 ANKRD36BP1Q96IX9 119 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 ZNF560Q96MR9 790 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 TSPAN18Q96SJ8 248 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 FOXQ1Q9C009 403 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 ZCWPW1Q9H0M4 648 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 SLITRK6Q9H5Y7 841 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 MAGEF1Q9HAY2 307 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.2□□□□□ -0.785e-8■■■■■ 402.4
NSMCE1-203ENST00000562039 ASAH2Q9NR71 780 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 INTS13Q9NVM9 706 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 DDX43Q9NXZ2 648 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 HPSEQ9Y251 543 aa10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 R3HCC1Q9Y3T6 440 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-203ENST00000562039 PVALEFA0A1B0GWK0 134 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 HUS1O60921 280 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 ATP2C2O75185 946 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 PRPF40AO75400 957 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 CST3P01034 146 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 TNNC2P02585 160 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 RPN1P04843 607 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 CYP11A1P05108 521 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 DCNP07585 359 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 ATF6P18850 670 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 GABRR2P28476 465 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 EPHB3P54753 998 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 PSMC1P62191 440 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 NHLH1Q02575 133 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 CYP24A1Q07973 514 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 TCF15Q12870 199 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 MYBPC2Q14324 1141 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 KNOP1Q1ED39 458 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 ASTLQ6HA08 431 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 CNNM4Q6P4Q7 775 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 DNAJB7Q7Z6W7 309 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 ALYREFQ86V81 257 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 XXYLT1Q8NBI6 393 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 CXorf38Q8TB03 319 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 SHKBP1Q8TBC3 707 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 PLEKHO2Q8TD55 490 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 ZNF516Q92618 1163 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 ERCC4Q92889 916 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 MMS19Q96T76 1030 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 SMG9Q9H0W8 520 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 ATXN3LQ9H3M9 355 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 TBC1D17Q9HA65 648 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 GTF3C4Q9UKN8 822 aa10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 MAGED2Q9UNF1 606 aaPredicted RBP10.19□□□□□ -0.78
NSMCE1-203ENST00000562039 NCANO14594 1321 aa10.18□□□□□ -0.78
NSMCE1-203ENST00000562039 ZNF197O14709 1029 aa10.18□□□□□ -0.78
NSMCE1-203ENST00000562039 POU2F2P09086 479 aa10.18□□□□□ -0.78
NSMCE1-203ENST00000562039 PDGFRBP09619 1106 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms