RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 UNGP13051 313 aaPredicted RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 IGBP1P78318 339 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CUL2Q13617 745 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TFDP1Q14186 410 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 PLCB4Q15147 1175 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 PTGISQ16647 500 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TUBB8Q3ZCM7 444 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 DCAF12L1Q5VU92 463 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 EFCAB13Q8IY85 973 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 IQCKQ8N0W5 287 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 SEC14L1Q92503 715 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 VCPIP1Q96JH7 1222 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TOX2Q96NM4 488 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TCHPQ9BT92 498 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CNOT8Q9UFF9 292 aaKnown RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 AMACRQ9UHK6 382 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 RASAL2Q9UJF2 1139 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 NOD1Q9Y239 953 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 PCDHA3Q9Y5H8 950 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 IGKV6-21A0A0C4DH24 114 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 GOLGA6CA6NDK9 693 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 HBP1O60381 514 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 ERLIN2O94905 339 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CD4P01730 458 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 GOLGA6DP0CG33 693 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 ITGA4P13612 1032 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CHRNA3P32297 505 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 GBP1P32455 592 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CTNNA1P35221 906 aaKnown RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 HSPA9P38646 679 aaKnown RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 SLC1A1P43005 524 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 PEX5P50542 639 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 LAMTOR4Q0VGL1 99 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 RINLQ6ZS11 566 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 WDR49Q8IV35 697 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 BRSK2Q8IWQ3 736 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CD302Q8IX05 232 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TSEN2Q8NCE0 465 aaKnown RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 FAM76AQ8TAV0 307 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TRAPPC12Q8WVT3 735 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CD101Q93033 1021 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
PCAT1-202ENST00000561978 HAPLN2Q9GZV7 340 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 ACP6Q9NPH0 428 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 GOLGA6AQ9NYA3 693 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CNTN6Q9UQ52 1028 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 CNTNAP2Q9UHC6 1331 aa12.36□□□□□ -0.43
PCAT1-202ENST00000561978 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 C17orf102A2RUQ5 167 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 TMEM110-MUSTN1A8MSY1 372 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 OGTO15294 1046 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 TREHO43280 583 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 VNN1O95497 513 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 FAM153BP0C7A2 387 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 INSRRP14616 1297 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 ITGB8P26012 769 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 NSFP46459 744 aaKnown RBP12.35□□□□□ -0.43
PCAT1-202ENST00000561978 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 DRG2P55039 364 aaKnown RBP12.35□□□□□ -0.43
PCAT1-202ENST00000561978 RWDD2BP57060 319 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 DR1Q01658 176 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 POU5F1Q01860 360 aaKnown RBP12.35□□□□□ -0.43
PCAT1-202ENST00000561978 MTMR3Q13615 1198 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 NCOA4Q13772 614 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 FAM153CQ494X1 144 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 LIN9Q5TKA1 542 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 LEKR1Q6ZMV7 388 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 C1orf131Q8NDD1 294 aaKnown RBP12.35□□□□□ -0.43
PCAT1-202ENST00000561978 ALG3Q92685 438 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 ACO2Q99798 780 aaKnown RBP12.35□□□□□ -0.43
PCAT1-202ENST00000561978 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 CCDC113Q9H0I3 377 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 TMEM39AQ9NV64 488 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 FAM153AQ9UHL3 310 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
PCAT1-202ENST00000561978 UMODL1Q5DID0 1318 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 PODXLO00592 558 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 TTI1O43156 1089 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 CYP1A1P04798 512 aaPredicted RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 PRKCBP05771 671 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 CLTAP09496 248 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 SRGAP2CP0DJJ0 459 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 ACO1P21399 889 aaKnown RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 CENPCQ03188 943 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 MCL1Q07820 350 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 GRIK4Q16099 956 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 DUOXA2Q1HG44 320 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 LMBRD2Q68DH5 695 aaPredicted RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 LRIG3Q6UXM1 1119 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 SESTD1Q86VW0 696 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 MAIP1Q8WWC4 291 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 WNT8BQ93098 351 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 SGSM3Q96HU1 749 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms